Logo
Information on SUBCLASS 1.3.2
Subclass Accession number: 8163
Subclass: 1.3.2 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 29

Average sequence ID (%) : 10.4 +/- 15.0
Average RMSD (Å) : 0.638 +/- 0.152

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: pXhXX
(φψ)-conformation: aapbb
Pattern: xx[dehknqrsy][cdehknstw]xxx
Conservation:-1.0530.7611.2670.2380.658-1.418-0.453
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bj4_A_311bj4   A4349RQRVGLEHHHHSEEaaaaxbx
1bkp_A_41bkp   A1521IINNGISHHHH-EEaaaaxbx
1c4t_A_2491c4t   A249255PEVNASIHHHH-EEaaaaxbb
1c7g_A_4471c7g   A447453RFFTARFHHHH-EEaaaaxbb
1dfo_A_131dfo   A2531RQEEHIEHHHHSEEaaaabxx
1dfx_*_451dfx   -4551MEKHVPVHHHHSEEaaaaxxb
1ejx_C_14811ejx   C14841490RHHCRLTHHHH-EEaaaabbb
1evu_A_4281evu   A433439AEVNSDLHHHH-EEaaaaxbx
1f28_A_41f28   A1622IINHGEDHHHH-EEaaaaxxx
1fp6_A_721fp6   A7278LEDVLKAHHHH-EEaaaabbx
1gp6_A_2041gp6   A204210GLEELLLHHHH-EEeaaaxbb
1ih7_A_7761ih7   A776782YISIASVHHHH-EEaaaaxxb
1iwe_A_3951iwe   A395401ILQKVEVHHHH-EEaaaaxbx
1j3k_C_3251j3k   C335341IMMNGNKHHHH-EEaaaaxxx
1jk7_A_2001jk7   A203209DLLWSDPHHHH-EEaaaaxbx
1k0i_A_631k0i   A6571MARDGLVHHHH-EEaaaaxbx
1k4g_A_1901k4g   A192198QAENAALHHHH-EEaaaabbb
1kwm_A_941kwm   A99105LLNKLDFHHHH-EEaaaabbb
1l9m_A_3851l9m   A390396AEVNADRHHHH-EEaaaapxb
1lrt_A_4661lrt   A469475LQSKAKIHHHH-EEaaaapbb
1m4l_A_941m4l   A99105ILDSMDIHHHH-EEaaaabbb
1nsa_*_941nsa   -99105FLDNLDFHHHH-EEaaaabbb
1nz0_A_131nz0   A2026IFKEGKSHHHHSEEaaaaxbb
1obr_*_941obr   -99105LVNNREIHHHH-EEaaaabbx
1p1j_A_1091p1j   A109115MTQCSTLHHHH-EEaaaabbb
1qlm_A_2191qlm   A230236ILYGGTVHHHH-EEaaaaxbb
1tsy_*_41tsy   -1319VLDEGHFHHHH-EEaaaaxxx
2ovw_A_632ovw   A6672CAKNCILHHHH-EEaaaabxb
3pvi_A_1463pvi   A149155VMEHGTKHHHHSEEaaaaxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dfx_*_451dfx   *     FEFE (III) ION K - 47
1dfx_*_451dfx   *     FEFE (III) ION H - 48
1evu_A_4281evu   A     CACALCIUM ION V - 435
1evu_A_4281evu   A     CACALCIUM ION N - 436
1evu_A_4281evu   A     CACALCIUM ION S - 437
1evu_A_4281evu   A     CACALCIUM ION D - 438
1gp6_A_2041gp6   A     QUE3,5,7,3',4'-PENTAHYDROXYFLAVONE Q - 211
1gp6_A_2041gp6   A     DH2(2S,3S)-2-(3,4-DIHYDROXYPHENYL)-3,5,7-TRIHYDROXY-2,3-DIHYDRO-4H-CHROMEN-4-ONE Q - 211
1gp6_A_2041gp6   A     SINSUCCINIC ACID K - 213
1gp6_A_2041gp6   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID K - 213
1gp6_A_2041gp6   A     QUE3,5,7,3',4'-PENTAHYDROXYFLAVONE K - 213
1gp6_A_2041gp6   A     SINSUCCINIC ACID N - 215
1gp6_A_2041gp6   A     QUE3,5,7,3',4'-PENTAHYDROXYFLAVONE N - 215
1gp6_A_2041gp6   A     SINSUCCINIC ACID Y - 217
1jk7_A_2001jk7   A     OKAOKADAIC ACID C - 202
1jk7_A_2001jk7   A     MNMANGANESE (II) ION L - 205
1jk7_A_2001jk7   A     OKAOKADAIC ACID W - 206
1k4g_A_1901k4g   A     AIQ2,6-DIAMINO-8-(1H-IMIDAZOL-2-YLSULFANYLMETHYL)-3H-QUINAZOLINE-4-ONE I - 201
1k4g_A_1901k4g   A     AIQ2,6-DIAMINO-8-(1H-IMIDAZOL-2-YLSULFANYLMETHYL)-3H-QUINAZOLINE-4-ONE Q - 202
1lrt_A_4661lrt   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL P - 467
1lrt_A_4661lrt   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL Q - 470
1lrt_A_4661lrt   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL T - 476
1lrt_A_4661lrt   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL L - 477
1obr_*_941obr   *     CACALCIUM ION V - 100
1obr_*_941obr   *     CACALCIUM ION N - 101
1obr_*_941obr   *     CACALCIUM ION N - 102
1obr_*_941obr   *     CACALCIUM ION R - 103
1obr_*_941obr   *     CACALCIUM ION E - 104
1obr_*_941obr   *     CACALCIUM ION Y - 106
1qlm_A_2191qlm   A     PO4PHOSPHATE ION I - 230
2ovw_A_632ovw   A     PCAPYROGLUTAMIC ACID C - 66
2ovw_A_632ovw   A     PCAPYROGLUTAMIC ACID A - 67
2ovw_A_632ovw   A     PCAPYROGLUTAMIC ACID C - 70
2ovw_A_632ovw   A     PCAPYROGLUTAMIC ACID I - 71
2ovw_A_632ovw   A     PCAPYROGLUTAMIC ACID L - 72
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gp6_A_2041gp6   A QUEQUE BINDING SITEK - 213
1gp6_A_2041gp6   A SINSIN BINDING SITEY - 217

Clusters included in this Subclass
CLUSTER: HE.0.0
CLUSTER: HE.1.7