Home

Classification

Query

Statistics

Contact

Links

Help

PDB code:

Information on SUBCLASS 1.3.13

Subclass Accession number: 8174 Subclass: 1.3.13 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates:

Number of loops: 3 Average sequence ID (%) : 60.0 +/- -4.4 Average RMSD (Å) : 0.233 +/- 0.058 Consensus geometry d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 90-135

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1j8u_A_315	1j8u	A	317	336	YIEKLATIYWFTVEFGLCKQ	HHHHHHHHHHHTTTT-EEEE	aaaaaaaaaaaaaaaxbbxb
1ltz_A_171	1ltz	A	171	190	ALPMLARLYWYTVEFGLINT	HHHHHHHHHHHTTTT-EEEE	aaaaaaaaaaaaaaaxbbxb
1toh_*_361	1toh	-	363	382	EIEKLSTVYWFTVEFGLCKQ	HHHHHHHHHHTTTTT-EEEE	aaaaaaaaaaaaaaaxbbbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1j8u_A_315	1j8u	A	THBTETRAHYDROBIOPTERIN	L - 321
1j8u_A_315	1j8u	A	THBTETRAHYDROBIOPTERIN	A - 322
1j8u_A_315	1j8u	A	FE2FE (II) ION	Y - 325
1j8u_A_315	1j8u	A	THBTETRAHYDROBIOPTERIN	Y - 325
1j8u_A_315	1j8u	A	THBTETRAHYDROBIOPTERIN	W - 326
1j8u_A_315	1j8u	A	FE2FE (II) ION	E - 330
1j8u_A_315	1j8u	A	THBTETRAHYDROBIOPTERIN	E - 330
1ltz_A_171	1ltz	A	HBL7,8-DIHYDRO-L-BIOPTERIN	L - 172
1ltz_A_171	1ltz	A	HBL7,8-DIHYDRO-L-BIOPTERIN	L - 175
1ltz_A_171	1ltz	A	HBL7,8-DIHYDRO-L-BIOPTERIN	A - 176
1ltz_A_171	1ltz	A	FEFE (III) ION	Y - 179
1ltz_A_171	1ltz	A	HBL7,8-DIHYDRO-L-BIOPTERIN	Y - 179
1ltz_A_171	1ltz	A	FEFE (III) ION	E - 184
1ltz_A_171	1ltz	A	HBL7,8-DIHYDRO-L-BIOPTERIN	E - 184
1toh_*_361	1toh	*	FEFE (III) ION	Y - 371
1toh_*_361	1toh	*	FEFE (III) ION	E - 376

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1toh_*_361	1toh	*	FEIRON BINDING SITE.	E - 376

Clusters included in this Subclass

CLUSTER: HE.4.217

CLUSTER: HE.5.305

For any comment or web-related incidence, send an email to the webmaster.