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Information on SUBCLASS 2.1.3
Subclass Accession number: 8189
Subclass: 2.1.3 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 20

Average sequence ID (%) : 13.6 +/- 14.4
Average RMSD (Å) : 0.735 +/- 0.232

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: pXcXXh
(φψ)-conformation: aalpbb
Pattern: xx[afiklmv]x[aegkqrs][adekqrt]x[gknqs]xx[agilpvy]x
Conservation:-0.529-0.646-0.333-0.4290.5820.496-0.4982.806-0.843-0.2950.322-0.633
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ceo_*_2551ceo   -266277IEFREKKKCKLYHHHHHHH--EEEaaaaaaalxbbb
1cke_A_181cke   A2334KAMAEALQWHLLHHHHHHHT-EEEaaaaaaalbxbb
1dp4_A_1631dp4   A173184MRVRERLNITVNHHHHHHH--EEEaaaaaaavxxbx
1dvj_A_1031dvj   A110121LNVAEEMGREVFHHHHHHHT-EEEaaaaaaavbbbb
1eep_A_561eep   A5970AIAIAKEGGIGIHHHHHHHTSEEEaaaaaaagbbbb
1em8_A_201em8   A2940AAERWRSGKRVLHHHHHHTT--EEaaaaaaavxxbb
1euz_A_2221euz   A229240KLAKEQLGMTVVHHHHHHH--EEEaaaaaaavxxxa
1f52_A_1891f52   A196207CLVMEQMGLVVEHHHHHHTT--EEaaaaaaavxbxa
1fui_A_1941fui   A195206NFFESWLGMKVQHHHHHHH--EEEaaaaaaavbbbb
1fxp_A_10601fxp   A10681079RKVKEEFGLKITHHHHHHH--EEEaaaaaaavbxbb
1g0o_A_641g0o   A7182VAAIKKNGSDAAHHHHHHTT--EEaaaaaaagbxbb
1isi_A_2101isi   A215226EKRLKDMGFQYSHHHHHHTT--EEaaaaaaavxxbb
1jw7_A_1571jw7   A173184AVDLGKHHIRVNHHHHHTTT-EEEaaaaaaavxbbb
1kqp_A_1281kqp   A144154YAIGGQEGLLV.HHHHHHHT-EE.aaaaaaavbxx.
1m1n_A_1631m1n   A168179KVKGAELSKTIVHHHHHHHT--EEaaaaaaalbxbb
1mo9_A_4041mo9   A404415EEEARAAGHEIVHHHHHHTT--EEaaaaaaavxxbb
1obr_*_2271obr   -238249NTMAQTNGYTPQHHHHHHH--EEEaaaaaaavxbxb
1odz_A_2921odz   A306316ARMAEARGKIP.HHHHHHHT-EE.aaaaaaavbbx.
1qf9_A_191qf9   A2435ANIVRDFGWVHLHHHHHHH--EEEaaaaaaavxxxb
1toh_*_2731toh   -278289RFLKERTGFQLRHHHHHHTS-EEEaaaaaaavxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dvj_A_1031dvj   A     UP66-AZA URIDINE 5'-MONOPHOSPHATE L - 123
1f52_A_1891f52   A     MPD2-METHYL-2,4-PENTANEDIOL Q - 189
1f52_A_1891f52   A     MPD2-METHYL-2,4-PENTANEDIOL D - 190
1f52_A_1891f52   A     MPD2-METHYL-2,4-PENTANEDIOL I - 191
1f52_A_1891f52   A     MPD2-METHYL-2,4-PENTANEDIOL R - 192
1f52_A_1891f52   A     MPD2-METHYL-2,4-PENTANEDIOL S - 193
1f52_A_1891f52   A     MPD2-METHYL-2,4-PENTANEDIOL E - 194
1f52_A_1891f52   A     ADPADENOSINE-5'-DIPHOSPHATE E - 207
1f52_A_1891f52   A     ADPADENOSINE-5'-DIPHOSPHATE A - 208
1f52_A_1891f52   A     MPD2-METHYL-2,4-PENTANEDIOL H - 209
1f52_A_1891f52   A     MNMANGANESE (II) ION H - 210
1fxp_A_10601fxp   A     PO4PHOSPHATE ION D - 1081
1g0o_A_641g0o   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 64
1jw7_A_1571jw7   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE M - 158
1jw7_A_1571jw7   A     DCNDICLOSAN M - 158
1jw7_A_1571jw7   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE K - 162
1jw7_A_1571jw7   A     DCNDICLOSAN K - 162
1jw7_A_1571jw7   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 186
1jw7_A_1571jw7   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 187
1jw7_A_1571jw7   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 188
1kqp_A_1281kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE F - 129
1kqp_A_1281kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE G - 132
1kqp_A_1281kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE N - 133
1kqp_A_1281kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE A - 136
1kqp_A_1281kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE R - 137
1kqp_A_1281kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE R - 139
1kqp_A_1281kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE Q - 143
1kqp_A_1281kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE Y - 144
1kqp_A_1281kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE G - 147
1kqp_A_1281kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE G - 148
1kqp_A_1281kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE G - 151
1kqp_A_1281kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE L - 152
1kqp_A_1281kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE L - 153
1kqp_A_1281kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE V - 154
1qf9_A_191qf9   A     ALFTETRAFLUOROALUMINATE ION K - 19
1qf9_A_191qf9   A     MGMAGNESIUM ION K - 19
1qf9_A_191qf9   A     ADPADENOSINE-5'-DIPHOSPHATE K - 19
1qf9_A_191qf9   A     C5PCYTIDINE-5'-MONOPHOSPHATE K - 19
1qf9_A_191qf9   A     ALFTETRAFLUOROALUMINATE ION G - 20
1qf9_A_191qf9   A     MGMAGNESIUM ION G - 20
1qf9_A_191qf9   A     ADPADENOSINE-5'-DIPHOSPHATE G - 20
1qf9_A_191qf9   A     ADPADENOSINE-5'-DIPHOSPHATE T - 21
1qf9_A_191qf9   A     ADPADENOSINE-5'-DIPHOSPHATE Q - 22
1qf9_A_191qf9   A     ALFTETRAFLUOROALUMINATE ION S - 36
1qf9_A_191qf9   A     MGMAGNESIUM ION S - 36
1qf9_A_191qf9   A     C5PCYTIDINE-5'-MONOPHOSPHATE S - 36

Clusters included in this Subclass
CLUSTER: HE.3.19