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Information on SUBCLASS 2.1.7
Subclass Accession number: 8193
Subclass: 2.1.7 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 20.5 +/- 19.1
Average RMSD (Å) : 0.729 +/- 0.160

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XpcXXh
(φψ)-conformation: aalpbb
Pattern: x[egkst][alt][ALM][AKT][AGKM][hnrt][GK][acgitv][aegrt][AFIPV][adnv][acklv]
Conservation:-0.397-0.822-0.0131.9531.3290.1090.1061.456-1.121-0.784-0.066-1.011-0.739
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c4k_A_2241c4k   A228240NSALAMAGGRPVYHHHTTTT--EEEEaaaaaaavxbxbx
1cbf_*_1701cbf   -170182LTDLAKHKCTIALHHHHHTT-SEEEEaaaaaaalbxbbx
1d7k_B_741d7k   B7789VKTLAATGTGFDCHHHHHTTT-EEEEaaaaaaagxxbxb
1d9e_A_11221d9e   A11251137VEAMAKTGAVINVHHHHHHTT-EEEEaaaaaaavxxbbx
1ebd_A_851ebd   A104116EGLLKGNKVEIVKHHHHHTTT-EEEEaaaaaaalbxxbx
1fxp_A_11081fxp   A11111123LLAAAKTGRAVNVHHHHHTTTSEEEEaaaaaaavxxbbb
1l7e_A_1061l7e   A109121VEALTKRKITAYAHHHHHTTT-EEEEaaaaaaalxxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1c4k_A_2241c4k   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 225
1c4k_A_2241c4k   A     PLPPYRIDOXAL-5'-PHOSPHATE V - 226
1cbf_*_1701cbf   *     SAHS-ADENOSYL-L-HOMOCYSTEINE L - 182
1cbf_*_1701cbf   *     SAHS-ADENOSYL-L-HOMOCYSTEINE F - 183
1d7k_B_741d7k   B     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) D - 88
1fxp_A_11081fxp   A     PO4PHOSPHATE ION K - 1124

Clusters included in this Subclass
CLUSTER: HE.3.121
CLUSTER: HE.5.116