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Information on SUBCLASS 2.2.4
Subclass Accession number: 8203
Subclass: 2.2.4 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 27

Average sequence ID (%) : 14.0 +/- 17.5
Average RMSD (Å) : 0.552 +/- 0.242

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXXXXX
(φψ)-conformation: aapabb
Pattern: xxxx[arst]xxxx
Conservation:-0.812-0.278-0.231-0.7882.548-0.086-0.259-0.1380.043
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aa6_*_4341aa6   -435443TASAADVILHHHT-SEEEaaaaxabbb
1bkj_A_691bkj   A6977YVESAAEFLHHHHSSEEEaaaaxabbb
1bs0_A_1341bs0   A139147AASLSPSQLHHHTSSSEEaaaabaxxb
1c8k_A_4221c8k   A425432LRRMSLVE.HHHH-SEE.aaaapabb.
1cjc_A_2591cjc   A264272RRASASRAWHHHT-SEEEaaaaxabbb
1cr0_A_4911cr0   A492500LRQLSDTIIHHH-SEEEEaaaaxabbb
1dv1_B_401dv1   B4149HVLLADETVHHHHSSEEEaaaaxabbb
1es5_A_1681es5   A172179TVVKTKAY.HHHT-SEE.aaaaxabb.
1eu1_A_4641eu1   A465473TARHADIVLHHHT-SEEEaaaaxabbb
1f5v_A_691f5v   A6977HVAQAAEFWHHHHSSEEEaaaapabbb
1ffv_B_1861ffv   B192200VFANAPVTVHHHH-SEEEaaaaxabbb
1ii2_A_711ii2   A8492FLDTREHLFHHHTSSEEEaaaaxabbb
1kqf_A_2641kqf   A265273TASVADIYAHHHT-SEEEaaaaxabbb
1ks9_A_581ks9   A6068FLATSDLLLHHHT-SEEEaaaaxabbb
1l5r_A_4221l5r   A425432LRRMSLIE.HHHH-SEE.aaaaxabb.
1l5w_A_3901l5w   A393400WAKLAVVH.HHHH-SEE.aaaaxabb.
1m2k_A_31m2k   A816TIAESKYLVHHHT-SSEEaaaaxabxb
1n62_B_1891n62   B195203TFAKAEVVSHHHH-SEEEaaaaxabbb
1o7d_C_5021o7d   C503511LTQTAERFQHHHH-SEEEaaaaxabbb
1pix_A_1941pix   A198206HSISPTVIIHHHSSSEEEaaaaxabbb
1pjs_A_2331pjs   A238246QIQQADIVVHHHS-SEEEaaaaxabbb
1pvd_A_2701pvd   A275283AVESADLILHHHT-SEEEaaaaxabbb
1q16_A_7771q16   A778786TCLYSDIILHHHT-SEEEaaaaxabbb
1tmo_*_4731tmo   -474482TCRFSDIVLHHHT-SEEEaaaababbb
1ygp_A_4231ygp   A425432LSRISIIE.HHHH-SEE.aaaaxaxx.
2hgs_A_2772hgs   A285293LLERSHAAKHHHHSSSEEaaaaxaxxb
3daa_A_2273daa   A229237EALKMDELFHHHT-SEEEaaaaxabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aa6_*_4341aa6   *     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE L - 443
1bkj_A_691bkj   A     FMNFLAVIN MONONUCLEOTIDE Y - 69
1f5v_A_691f5v   A     FMNFLAVIN MONONUCLEOTIDE H - 69
1m2k_A_31m2k   A     APRADENOSINE-5-DIPHOSPHORIBOSE T - 19
1pjs_A_2331pjs   A     PO4PHOSPHATE ION Q - 240
1tmo_*_4731tmo   *     2MDGUANYLATE-O'-PHOSPHORIC ACID MONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,5,6,7,8A,9,10,10A-OCTAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL) ESTER L - 482
3daa_A_2273daa   A     PDA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-PROPIONIC ACID T - 239
3daa_A_2273daa   A     PDA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-PROPIONIC ACID S - 240

Clusters included in this Subclass
CLUSTER: HE.1.27
CLUSTER: HE.3.32
CLUSTER: HE.4.36