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Information on SUBCLASS 2.2.20
Subclass Accession number: 8219
Subclass: 2.2.20 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 7.1 +/- 10.1
Average RMSD (Å) : 0.767 +/- 0.231

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XpXXXX
(φψ)-conformation: aapabp
Pattern: [DR][FIL][EQR]x[FGW][ACV]x[DEK]x[PQ]x[KPT][ILV]x
Conservation:0.3530.4100.799-1.6620.0220.022-0.8850.669-1.2731.737-0.885-0.4961.187-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bs0_A_2861bs0   A301313RFRAGVQDLPFTL.HHHHHHTTSS-EE.aaaaaaaababbb.
1khh_A_921khh   A97110RLQNWALKQPHKVVHHHHHHTT-SSEEEaaaaaaaaxabpbb
4uag_A_944uag   A94107DIELFCREAQAPIVHHHHHHTT--S-EEaaaaaaaapabpbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1khh_A_921khh   A     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 94
1khh_A_921khh   A     SAHS-ADENOSYL-L-HOMOCYSTEINE R - 97
4uag_A_944uag   A     UAGURIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE-D-GLUTAMATE D - 94
4uag_A_944uag   A     UAGURIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE-D-GLUTAMATE I - 95
4uag_A_944uag   A     KCXLYSINE NZ-CARBOXYLIC ACID T - 110

Clusters included in this Subclass
CLUSTER: HE.6.147