Information on SUBCLASS 8.2.1 |
Subclass Accession number: 823
Subclass: 8.2.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.12 (>75 %) 1.12.2 (>75 %) 1.12.2.1 (>75 %) GO : GO:0003677 (>50 %) GO:0003700 (>75 %) GO:0008901 (>75 %) GO:0016151 (>75 %) GO:0016695 (>75 %) GO:0016699 (>75 %) GO:0046914 (>75 %) SCOP : 48726 (>75 %) 48727 (>75 %) 50036 (>50 %) 56761 (>75 %) 56762 (>75 %) 56763 (>75 %) 63748 (>75 %) 89299 (>75 %) |
Number of loops: 7 Average sequence ID (%) : 25.8 +/- 22.2 Average RMSD (Å) : 0.657 +/- 0.190 Consensus geometry
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Consensus Sequence: | phpGXppppcXh |
(φψ)-conformation: | bppgbpaaapbb |
Pattern: | [EKR] | [FILVY] | [kry] | [ILVY] | [HKRW] | [FILVW] | [dkq] | [GN] | [DSTWY] | [DNS] | [DEHNQ] | [crst] | [EHNY] | [ADN] | [fhiy] | [LW] | x |
Conservation: | 0.998 | -0.182 | -0.591 | -0.138 | 0.067 | -0.376 | -0.823 | 2.047 | -0.668 | 0.464 | 0.056 | -1.231 | -0.187 | 0.524 | -0.603 | 2.128 | -1.486 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1oi1_A_92 | 1oi1 | A | 92 | 108 | RLRLRLDGSDNRNDFWR | EEEEEETTS-TT--EEE | bbxbbxpvbxaaaxbbb |
1oz2_A_267 | 1oz2 | A | 267 | 283 | RLRLHFDGYSECHDFWV | EEEEEETTS-GGG-EEE | bbxbbxpvbxaaapbbb |
1oz2_A_374 | 1oz2 | A | 374 | 390 | RFLVHFDNWDDTYDYWC | EEEEEETTS-GGG-EEE | bbbxbxpvbpaaaxbxb |
1oz2_A_478 | 1oz2 | A | 478 | 494 | RIKIHFDGWSHGYDFWI | EEEEEETTB-GGG-EEE | bbbxbxpvxpaaaxbxb |
1pfb_A_40 | 1pfb | A | 42 | 58 | EYRVKWKGWNQRYNTWE | EEEEEETTS-GGG-EEE | bbxbxxxvbpaaapbxb |
1qfm_A_209 | 1qfm | A | 209 | 225 | KLYYHVLGTDQSEDILC | EEEEEETTS-GGG-EEE | bbbbbxpvbxaaapxxa |
1qg3_A_1156 | 1qg3 | A | 1158 | 1174 | RVKYWIQGDSESEAHLL | EEEEEETTS-GGG-EEE | bbbbbxpgxxaaaxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1oz2_A_374 | 1oz2 | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | N - 381 |
1oz2_A_374 | 1oz2 | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | W - 382 |
1oz2_A_374 | 1oz2 | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | D - 383 |
1oz2_A_374 | 1oz2 | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | T - 385 |
1oz2_A_374 | 1oz2 | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | Y - 386 |
1oz2_A_478 | 1oz2 | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | K - 480 |
1oz2_A_478 | 1oz2 | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | F - 483 |
1oz2_A_478 | 1oz2 | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | W - 486 |
1oz2_A_478 | 1oz2 | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | Y - 490 |
1pfb_A_40 | 1pfb | A | M3LN-TRIMETHYLLYSINE | W - 47 |
1pfb_A_40 | 1pfb | A | M3LN-TRIMETHYLLYSINE | K - 48 |
1pfb_A_40 | 1pfb | A | M3LN-TRIMETHYLLYSINE | W - 50 |
1pfb_A_40 | 1pfb | A | M3LN-TRIMETHYLLYSINE | Y - 54 |
1pfb_A_40 | 1pfb | A | M3LN-TRIMETHYLLYSINE | T - 56 |
1pfb_A_40 | 1pfb | A | M3LN-TRIMETHYLLYSINE | E - 58 |
1qfm_A_209 | 1qfm | A | GOLGLYCEROL | C - 225 |
1qfm_A_209 | 1qfm | A | GOLGLYCEROL | A - 226 |
Clusters included in this Subclass |
CLUSTER: HA.7.19 |