Information on SUBCLASS 2.3.8 |
Subclass Accession number: 8232
Subclass: 2.3.8 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 14.3 +/- 15.0 Average RMSD (Å) : 0.600 +/- 0.122 Consensus geometry
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Consensus Sequence: | pXcphp |
(φψ)-conformation: | aalabb |
Pattern: | x | x | [adek] | [al] | [fil] | [AENST] | [gs] | [GKQ] | [EKR] | [FHVY] | x | [ILV] | [CLV] | [ael] |
Conservation: | -1.080 | -1.289 | -0.808 | -0.714 | -0.359 | -0.126 | 0.187 | 0.581 | 1.631 | 0.788 | -0.583 | 1.782 | 0.917 | -0.925 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ivy_A_350 | 1ivy | A | 353 | 366 | YLKLLSSQKYQILL | HHHHHHHT--EEEE | aaaaaaalabxbbb |
1j0x_O_10 | 1j0x | O | 16 | 29 | TRAAFNSGKVDVVA | HHHHHHH-SSEEEE | aaaaaaavabbxab |
1kt8_A_269 | 1kt8 | A | 275 | 288 | LDMAQTWGEFRVVE | HHHHHHH-SSEEEE | aaaaaaavabxbbb |
1rhs_*_164 | 1rhs | - | 167 | 180 | VLENLESKRFQLVD | HHHHHHH--SEEEE | aaaaaaavabxbbb |
5rub_A_14 | 5rub | A | 14 | 27 | EEDLIAGGEHVLCA | HHHHHHHT-EEEEE | aaaaaaavabxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kt8_A_269 | 1kt8 | A | ILPN-[O-PHOSPHONO-PYRIDOXYL]-ISOLEUCINE | V - 269 |
1kt8_A_269 | 1kt8 | A | ILPN-[O-PHOSPHONO-PYRIDOXYL]-ISOLEUCINE | V - 270 |
1kt8_A_269 | 1kt8 | A | ILPN-[O-PHOSPHONO-PYRIDOXYL]-ISOLEUCINE | R - 271 |
1rhs_*_164 | 1rhs | * | CSSS-MERCAPTOCYSTEINE | V - 179 |
1rhs_*_164 | 1rhs | * | CSSS-MERCAPTOCYSTEINE | D - 180 |
Clusters included in this Subclass |
CLUSTER: HE.2.60 |