Logo
Information on SUBCLASS 2.4.4
Subclass Accession number: 8243
Subclass: 2.4.4 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 11

Average sequence ID (%) : 12.6 +/- 16.9
Average RMSD (Å) : 0.718 +/- 0.160

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: pXhpXh
(φψ)-conformation: aababb
Pattern: [degknq]x[ailm]xxxx[DEKN]x[afgvy][DEPS][aegknrst][ILTV][agilvy]
Conservation:-0.033-0.406-0.221-1.071-0.7570.087-0.5831.990-0.703-0.2881.640-0.4601.617-0.812
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ej2_A_171ej2   A2134QVIKSILEEVDELIHHHHHHTTT-SEEEaaaaaaaaababbx
1gdh_A_361gdh   A3750DEMIETAKSVDALLHHHHHHHTT-SEEEaaaaaaaaababbb
1gqo_A_531gqo   A5871DAIHEAEEQYSGIVHHHHHHTTT-SEEEaaaaaaaaNbabbb
1iy9_A_1971iy9   A202215NVQRDVKEIFPITKHHHHHHHTT-SEEEaaaaaaaaababbb
1izo_A_1051izo   A120133KAAVTRWEKADEVVHHHHHHHTTSSEEEaaaaaaaaaxabbb
1php_*_1981php   -203216GVIDNLLEKVDNLIHHHHHHTTT-SEEEaaaaaaaaaxabbb
1pvd_A_1241pvd   A124137VFHRMSANISETTAHHHHHHGGG-SEEEaaaaaaaaababbb
1qpg_*_2181qpg   -219232QLIDNLLDKVDSIIHHHHHHTTT-SEEEaaaaaaaaaxabbb
1trb_*_1551trb   -159172EEALYLSNIASEVHHHHHHHTTTSSEEEaaaaaaaaaxabbb
1vdc_*_1551vdc   -159172EEANFLTKYGSKVYHHHHHHTTTSSEEEaaaaaaaaaxabbx
2cev_A_1022cev   A104117GTLAGVAKHYERLGHHHHHHHTT-SSEEaaaaaaaaababxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ej2_A_171ej2   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE R - 17
1ej2_A_171ej2   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 18
1ej2_A_171ej2   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE H - 19
1ej2_A_171ej2   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Q - 21
1ej2_A_171ej2   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 22
1gqo_A_531gqo   A     GOLGLYCEROL N - 73
1izo_A_1051izo   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 111
1php_*_1981php   *     ADPADENOSINE-5'-DIPHOSPHATE D - 200
1php_*_1981php   *     ADPADENOSINE-5'-DIPHOSPHATE K - 201
2cev_A_1022cev   A     MNMANGANESE (II) ION W - 120
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1vdc_*_1551vdc   * ACTACTIVE SITE.E - 159

Clusters included in this Subclass
CLUSTER: HE.4.64
CLUSTER: HE.6.91