Information on SUBCLASS 8.4.1 |
Subclass Accession number: 825
Subclass: 8.4.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : - (>75 %) 1 (>75 %) 2.5 (>75 %) 2.5.1 (>75 %) 2.5.1.164 (>75 %) 6 (>75 %) GO : GO:0004766 (>75 %) GO:0005489 (>75 %) GO:0005507 (>75 %) GO:0008168 (>75 %) GO:0008757 (>75 %) GO:0015036 (>75 %) GO:0016741 (>75 %) GO:0016765 (>75 %) GO:0046914 (>75 %) SCOP : 49502 (>75 %) 49503 (>75 %) 49504 (>75 %) 51904 (>75 %) 51905 (>75 %) 51943 (>75 %) 53334 (>75 %) 53335 (>75 %) 69557 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 18.8 +/- 34.7 Average RMSD (Å) : 1.350 +/- 0.526 Consensus geometry
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Consensus Sequence: | hXXhXpXcXXXp |
(φψ)-conformation: | bbppabplpppb |
Pattern: | [FIK] | [LVW] | [ikv] | [EPS] | [AP] | [AKT] | [qt] | [EPQ] | [GN] | [eg] | [LTY] | x | [DHQ] | [FIV] | [ERT] | [LTV] |
Conservation: | -1.457 | -0.319 | -1.351 | -0.122 | 1.782 | -0.445 | -0.238 | 0.538 | 2.336 | -0.347 | -0.730 | -0.531 | 0.506 | 0.695 | -0.284 | -0.032 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aye_*_36 | 1aye | - | 37 | 52 | FWKSPTTPGETAHVRV | EEE---STT--EEEEE | xabxxabpvxxbbbxb |
1fl2_A_290 | 1fl2 | A | 292 | 307 | KLIPAAVEGGLHQIET | EEE--SSTT--EEEEE | bbbxpabpvxxxbbxb |
1hyu_A_290 | 1hyu | A | 292 | 307 | KLVPAATEGGLHQIET | EEE--SSTTS-EEEEE | bbbxpabxvxbxbbxb |
1sx5_A_62 | 1sx5 | A | 62 | 77 | IVEEPKQQNHYPDFTL | EEE--SSTT-B-SEEE | xbbbpabxvbxwabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fl2_A_290 | 1fl2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | A - 290 |
1fl2_A_290 | 1fl2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | S - 291 |
1sx5_A_62 | 1sx5 | A | MNMANGANESE (II) ION | Q - 68 |
1sx5_A_62 | 1sx5 | A | MNMANGANESE (II) ION | H - 71 |
1sx5_A_62 | 1sx5 | A | MNMANGANESE (II) ION | D - 74 |
Clusters included in this Subclass |
CLUSTER: HA.9.10 |