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Information on SUBCLASS 8.4.1
Subclass Accession number: 825
Subclass: 8.4.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  1 (>75 %)  2.5 (>75 %)  2.5.1 (>75 %)  2.5.1.164 (>75 %)  6 (>75 %)  
GO : GO:0004766 (>75 %)  GO:0005489 (>75 %)  GO:0005507 (>75 %)  GO:0008168 (>75 %)  GO:0008757 (>75 %)  GO:0015036 (>75 %)  GO:0016741 (>75 %)  GO:0016765 (>75 %)  GO:0046914 (>75 %)  
SCOP : 49502 (>75 %)  49503 (>75 %)  49504 (>75 %)  51904 (>75 %)  51905 (>75 %)  51943 (>75 %)  53334 (>75 %)  53335 (>75 %)  69557 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 18.8 +/- 34.7
Average RMSD (Å) : 1.350 +/- 0.526

Consensus geometry
d (Å): 5 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hXXhXpXcXXXp
(φψ)-conformation: bbppabplpppb
Pattern: [FIK][LVW][ikv][EPS][AP][AKT][qt][EPQ][GN][eg][LTY]x[DHQ][FIV][ERT][LTV]
Conservation:-1.457-0.319-1.351-0.1221.782-0.445-0.2380.5382.336-0.347-0.730-0.5310.5060.695-0.284-0.032
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aye_*_361aye   -3752FWKSPTTPGETAHVRVEEE---STT--EEEEExabxxabpvxxbbbxb
1fl2_A_2901fl2   A292307KLIPAAVEGGLHQIETEEE--SSTT--EEEEEbbbxpabpvxxxbbxb
1hyu_A_2901hyu   A292307KLVPAATEGGLHQIETEEE--SSTTS-EEEEEbbbxpabxvxbxbbxb
1sx5_A_621sx5   A6277IVEEPKQQNHYPDFTLEEE--SSTT-B-SEEExbbbpabxvbxwabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fl2_A_2901fl2   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 290
1fl2_A_2901fl2   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 291
1sx5_A_621sx5   A     MNMANGANESE (II) ION Q - 68
1sx5_A_621sx5   A     MNMANGANESE (II) ION H - 71
1sx5_A_621sx5   A     MNMANGANESE (II) ION D - 74

Clusters included in this Subclass
CLUSTER: HA.9.10