Information on SUBCLASS 2.6.7 |
Subclass Accession number: 8267
Subclass: 2.6.7 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 12.8 +/- 13.1 Average RMSD (Å) : 0.800 +/- 0.235 Consensus geometry
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Consensus Sequence: | pXGhXX |
(φψ)-conformation: | aagpbb |
Pattern: | x | [aep] | [AEF] | [cdtv] | x | [klv] | [AIL] | [AKQR] | [dehq] | [cny] | [g] | [CFGLV] | [egnr] | [sv] | x | [agkr] | x | [ans] |
Conservation: | -0.130 | 0.002 | 0.297 | -0.628 | -0.808 | -0.408 | 0.972 | 1.168 | -0.013 | -0.505 | 3.258 | -0.911 | -0.958 | -0.148 | -0.504 | -0.675 | -0.108 | 0.098 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1azs_A_409 | 1azs | A | 421 | 438 | ARFDKLAAENHCLRIKIL | HHHHHHHHHHTEEEEEEE | aaaaaaaaaavxxxabbb |
1b8o_A_222 | 1b8o | A | 222 | 239 | VPEVIVARHCGLRVFGFS | HHHHHHHHHTT-EEEEEE | aaaaaaaaaavxxbbbbb |
1f9z_A_82 | 1f9z | A | 83 | 100 | AEACEKIRQNGGNVTREA | HHHHHHHHHTT-EEEEEE | aaaaaaaaaagpbbabpp |
1l8a_A_735 | 1l8a | A | 740 | 757 | EAAEILAKDYGVGSDVYS | HHHHHHHHHH-EEEEEEE | aaaaaaaaaavxxbbbbx |
1lhp_A_21 | 1lhp | A | 22 | 39 | RAATFPLQVLGFEVDAVN | HHHHHHHHHTT-EEEEEE | aaaaaaaaaavxxbbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1azs_A_409 | 1azs | A | FKPMETHYLPIPERAZINOFORSKOLIN | L - 438 |
1b8o_A_222 | 1b8o | A | IMH1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL | T - 242 |
1b8o_A_222 | 1b8o | A | IMH1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL | N - 243 |
1b8o_A_222 | 1b8o | A | IMH1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL | K - 244 |
Clusters included in this Subclass |
CLUSTER: HE.2.53 |