Information on SUBCLASS 2.7.5 |
Subclass Accession number: 8275
Subclass: 2.7.5 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 12.0 +/- 12.9 Average RMSD (Å) : 0.750 +/- 0.176 Consensus geometry
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Consensus Sequence: | ppXXhp |
(φψ)-conformation: | aabpbb |
Pattern: | [egkn] | [aek] | [ALMT] | [akl] | [ikv] | x | [AILTV] | [dens] | [EGKQR] | x | [DNPV] | [fiv] | [dnv] | [CGIV] | [FGITV] |
Conservation: | -0.779 | 0.406 | 1.269 | -0.256 | -0.234 | -1.088 | 0.990 | 0.253 | 1.081 | -2.267 | 0.582 | 1.061 | 0.535 | -0.819 | -0.734 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fl2_A_266 | 1fl2 | A | 271 | 285 | GALKVHVDEYDVDVI | HHHHHHHHTS-EEEE | aaaaaaaaabxbxxb |
1g8m_A_328 | 1g8m | A | 328 | 342 | VPTAKIISREVSDGV | HHHHHHHHTS-EEEE | aaaaaaaaabxbaeb |
1kkh_A_296 | 1kkh | A | 297 | 311 | KELLKELNKEDVRIF | HHHHHHHHTSS-EEE | aaaaaaaaaxxbbbb |
1ni9_A_29 | 1ni9 | A | 38 | 52 | NAMRIMLNQVNIDGT | HHHHHHHTTSS-EEE | aaaaaaaaaxxbbxb |
2frv_A_54 | 2frv | A | 57 | 71 | EEALHEAIKGDFVCV | HHHHHHHTTS-EEEE | aaaaaaaaabxbbbb |
4ubp_C_176 | 4ubp | C | 181 | 195 | EKMLKSTEGLPINVG | HHHHHHHTT-SSEEE | aaaaaaaaabxbxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g8m_A_328 | 1g8m | A | MSESELENOMETHIONINE | R - 336 |
1g8m_A_328 | 1g8m | A | MSESELENOMETHIONINE | E - 337 |
1g8m_A_328 | 1g8m | A | GGUANOSINE-5'-MONOPHOSPHATE | E - 337 |
1g8m_A_328 | 1g8m | A | MSESELENOMETHIONINE | V - 343 |
1g8m_A_328 | 1g8m | A | GGUANOSINE-5'-MONOPHOSPHATE | V - 343 |
2frv_A_54 | 2frv | A | FS4IRON/SULFUR CLUSTER | E - 73 |
Clusters included in this Subclass |
CLUSTER: HE.3.134 |
CLUSTER: HE.4.256 |
CLUSTER: HE.4.300 |
CLUSTER: HE.5.235 |