Information on SUBCLASS 2.7.6 |
Subclass Accession number: 8276
Subclass: 2.7.6 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 16.9 +/- 28.1 Average RMSD (Å) : 0.640 +/- 0.207 Consensus geometry
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Consensus Sequence: | ppXhXX |
(φψ)-conformation: | aabpbb |
Pattern: | [AEG] | [GNQR] | [aks] | [CILT] | [aqs] | [CEKR] | [AFM] | [avy] | [ehk] | [DENW] | x | [fp] | [TV] | x | [ATV] | x |
Conservation: | 0.973 | 0.192 | -0.750 | 0.191 | 0.041 | -0.453 | 0.065 | -0.236 | -0.006 | -0.204 | -0.924 | -0.229 | 2.781 | -1.300 | 1.106 | -1.247 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cqd_A_120 | 1cqd | A | 120 | 135 | EQSLQKAVANQPVSVT | HHHHHHHHTTS-EEEE | aaaaaaaaaabxbxbb |
1kht_A_64 | 1kht | A | 75 | 90 | GRKIAEMAKESPVAVD | HHHHHHHHTTS-EEEE | aaaaaaaaaabxbbxx |
1ki9_A_64 | 1ki9 | A | 75 | 90 | GRKIAEMVKESPVVVD | HHHHHHHTTTS-EEEE | aaaaaaaaaabxbbbx |
1mvl_A_35 | 1mvl | A | 36 | 51 | GNLCHCFTEWAEVRAV | HHHHHHHHTTSEEEEE | aaaaaaaaaabxbbbb |
1od4_A_1702 | 1od4 | A | 1712 | 1727 | AGATSRAYHDIFTITL | HHHHHHHHTTS-EEEE | aaaaaaaaaabxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1od4_A_1702 | 1od4 | A | MSESELENOMETHIONINE | I - 1711 |
1od4_A_1702 | 1od4 | A | MSESELENOMETHIONINE | F - 1723 |
1od4_A_1702 | 1od4 | A | MSESELENOMETHIONINE | I - 1725 |
1od4_A_1702 | 1od4 | A | MSESELENOMETHIONINE | C - 1730 |
1od4_A_1702 | 1od4 | A | MSESELENOMETHIONINE | R - 1731 |
Clusters included in this Subclass |
CLUSTER: HE.4.135 |