Information on SUBCLASS 2.7.9 |
Subclass Accession number: 8279
Subclass: 2.7.9 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 9.3 +/- 12.2 Average RMSD (Å) : 0.700 +/- 0.173 Consensus geometry
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Consensus Sequence: | pXpXhX |
(φψ)-conformation: | aabpbb |
Pattern: | [LVW] | [AEL] | [AGL] | [ADR] | [KMQ] | [CFI] | [AIK] | [ENQ] | [MR] | x | [KT] | x | [EST] | [EP] | [FV] | x | [CLV] | x |
Conservation: | -0.159 | -1.198 | -1.068 | -0.938 | 0.361 | 0.101 | -1.198 | 1.011 | 1.075 | -1.328 | 1.075 | 0.445 | 0.231 | 2.123 | 0.720 | -1.068 | 0.361 | -0.548 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ki9_A_64 | 1ki9 | A | 73 | 90 | LAGRKIAEMVKESPVVVD | HHHHHHHHHTTTS-EEEE | aaaaaaaaaaaabxbbbx |
1p49_A_260 | 1p49 | A | 266 | 283 | VEAAQFIQRNTETPFLLV | HHHHHHHHTTTTS-EEEE | aaaaaaaaaaaabwbbbb |
1rp1_*_85 | 1rp1 | - | 85 | 102 | WLLDMCKNMFKVEEVNCI | HHHHHHHHHTTT--EEEE | aaaaaaaaaaaabxbxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1p49_A_260 | 1p49 | A | NAGN-ACETYL-D-GLUCOSAMINE | Q - 262 |
1p49_A_260 | 1p49 | A | NAGN-ACETYL-D-GLUCOSAMINE | R - 263 |
Clusters included in this Subclass |
CLUSTER: HE.6.223 |