Information on SUBCLASS 5.3.1 |
Subclass Accession number: 83
Subclass: 5.3.1 Type: HA beta-beta hairpin DB: ArchDB-KI |
Number of loops: 3 Average sequence ID (%) : 85.2 +/- 0.3 Average RMSD (Å) : 0.29 +/- 0.00 Consensus geometry
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Consensus Sequence: | WhNEEDHXR |
(φψ)-conformation: | bblFababb |
Pattern: | [F] | [L] | [V] | [W] | [IV] | [N] | [E] | [E] | [D] | [H] | [LT] | [R] | [IV] | [I] | [S] | [M] | [EQ] | [K] |
Conservation: | 0.488 | -0.501 | -0.501 | 2.963 | -0.748 | 0.488 | -0.007 | -0.007 | 0.488 | 1.478 | -1.624 | -0.007 | -0.748 | -0.501 | -0.501 | -0.007 | -0.747 | -0.007 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bg0_*_218 | 1bg0 | - | 218 | 235 | FLVWVNEEDHLRIISMQK | EEEEESSSSSEEEEEEEE | bbbxbvFababbxbbbbx |
1crk_A_220 | 1crk | A | 220 | 237 | FLVWINEEDHTRVISMEK | EEEEESSSSSEEEEEEEE | bbbbxvFaeabbxbbbbx |
2crk_*_225 | 2crk | - | 225 | 242 | FLVWVNEEDHLRVISMEK | EEEEESSSSSEEEEEEEE | bbbbbvaababbbbbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bg0_*_218 | 1bg0 | * | ADPADENOSINE-5'-DIPHOSPHATE | W - 221 |
1bg0_*_218 | 1bg0 | * | MGMAGNESIUM ION | W - 221 |
1bg0_*_218 | 1bg0 | * | ADPADENOSINE-5'-DIPHOSPHATE | E - 224 |
1bg0_*_218 | 1bg0 | * | MGMAGNESIUM ION | E - 224 |
1bg0_*_218 | 1bg0 | * | ADPADENOSINE-5'-DIPHOSPHATE | E - 225 |
1bg0_*_218 | 1bg0 | * | MGMAGNESIUM ION | E - 225 |
1bg0_*_218 | 1bg0 | * | DARD-ARGININE | E - 225 |
1bg0_*_218 | 1bg0 | * | ADPADENOSINE-5'-DIPHOSPHATE | R - 229 |
1bg0_*_218 | 1bg0 | * | MGMAGNESIUM ION | R - 229 |
1bg0_*_218 | 1bg0 | * | DARD-ARGININE | R - 229 |
1bg0_*_218 | 1bg0 | * | ADPADENOSINE-5'-DIPHOSPHATE | I - 231 |
1bg0_*_218 | 1bg0 | * | ADPADENOSINE-5'-DIPHOSPHATE | M - 233 |
1bg0_*_218 | 1bg0 | * | ADPADENOSINE-5'-DIPHOSPHATE | Q - 234 |
1bg0_*_218 | 1bg0 | * | ADPADENOSINE-5'-DIPHOSPHATE | K - 235 |
1crk_A_220 | 1crk | A | PO4PHOSPHATE ION | W - 223 |
1crk_A_220 | 1crk | A | PO4PHOSPHATE ION | E - 227 |
1crk_A_220 | 1crk | A | PO4PHOSPHATE ION | R - 231 |
1crk_A_220 | 1crk | A | PO4PHOSPHATE ION | I - 233 |
Bibliographic annotations |
Loop | PDB | Chain | Annotation | Residue |
1crk_A_220 | 1crk RefK.FRITZ-WOLF,T.SCHNYDER,T.WALLIMANN,W.KABSCH. STRUCTURE OF MITOCHONDRIAL CREATINE KINASE NATURE v.381;341,1996 | A | ATP BINDING RESIDUE | W - 223 |
1crk_A_220 | 1crk RefK.FRITZ-WOLF,T.SCHNYDER,T.WALLIMANN,W.KABSCH. STRUCTURE OF MITOCHONDRIAL CREATINE KINASE NATURE v.381;341,1996 | A | Mg ION BINDING RESIDUE | E - 226 |
1crk_A_220 | 1crk RefK.FRITZ-WOLF,T.SCHNYDER,T.WALLIMANN,W.KABSCH. STRUCTURE OF MITOCHONDRIAL CREATINE KINASE NATURE v.381;341,1996 | A | Mg ION BINDING RESIDUE | E - 226 |
1crk_A_220 | 1crk RefK.FRITZ-WOLF,T.SCHNYDER,T.WALLIMANN,W.KABSCH. STRUCTURE OF MITOCHONDRIAL CREATINE KINASE NATURE v.381;341,1996 | A | Mg ION BINDING RESIDUE | E - 227 |
1crk_A_220 | 1crk RefK.FRITZ-WOLF,T.SCHNYDER,T.WALLIMANN,W.KABSCH. STRUCTURE OF MITOCHONDRIAL CREATINE KINASE NATURE v.381;341,1996 | A | ATP BINDING RESIDUE | M - 235 |
Clusters included in this Subclass |
CLUSTER: HA.4.5 |