Information on SUBCLASS 3.2.4 |
Subclass Accession number: 8308
Subclass: 3.2.4 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 23 Average sequence ID (%) : 13.2 +/- 14.5 Average RMSD (Å) : 0.778 +/- 0.165 Consensus geometry
|
Consensus Sequence: | pXGhpXX |
(φψ)-conformation: | aalpabb |
Pattern: | x | [acfgilvy] | [aeknqrst] | [adeknqrs] | x | [GKNRS] | x | [deknpqrst] | x | x | x | x |
Conservation: | -0.541 | -0.178 | 0.100 | 0.491 | -0.640 | 2.766 | -0.611 | 0.102 | -0.627 | -0.101 | -0.760 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a49_A_435 | 1a49 | A | 439 | 450 | QVARYRPRAPII | HHHHT--SS-EE | aaaaalxaxxxx |
1b37_A_14 | 1b37 | A | 22 | 33 | RLSEAGITDLLI | HHHHTT---EEE | aaaaavxaxbbb |
1brm_A_75 | 1brm | A | 84 | 95 | KLRESGWQGYWI | HHHTTT---EEE | aaaaavpaxxbb |
1dii_A_134 | 1dii | A | 140 | 149 | YIQENNLPVM.. | HHHHTT--EE.. | aaaaalxabb.. |
1e0c_A_235 | 1e0c | A | 242 | 253 | IAKALGYPRVKG | HHHHTT-S-EEE | aaaaavxabbbb |
1eq2_B_10 | 1eq2 | B | 18 | 29 | ALNDKGITDILV | HHHTTT---EEE | aaaaavxaxbbx |
1f05_A_212 | 1f05 | A | 223 | 234 | YYKKFSYKTIVM | HHHHTT---EEE | aaaaalxaxxxb |
1gte_A_197 | 1gte | A | 205 | 216 | FLARLGYSDITI | HHHHTT---EEE | aaaaagxabbbb |
1h2k_A_125 | 1h2k | A | 134 | 145 | DIQQRGGEERLY | HHHHTT---EEE | aaaaalxapbbb |
1h49_A_428 | 1h49 | A | 443 | 454 | ESIDLGSNVQGY | HHHHTT--EEEE | aaaaagpaxabb |
1hrk_A_356 | 1hrk | A | 356 | 367 | LAKECGVENIRR | HHHHTT-SEEEE | aaaaavxabbbb |
1kcz_A_365 | 1kcz | A | 374 | 384 | IGMACGARQVL. | HHHHHT-SEEE. | aaaaavpabbx. |
1kqf_A_171 | 1kqf | A | 180 | 190 | FARSLGMLAVD. | HHHHTTB--EE. | aaaaavxaxbb. |
1m2k_A_103 | 1m2k | A | 103 | 114 | LHERAGSRNVIH | HHHHTT--SEEE | aaaaagxabbbx |
1nsa_*_254 | 1nsa | - | 257 | 268 | WAYNQGIKYSFT | HHHHTT-S-EEE | aaaaagxabbbb |
1nwc_A_76 | 1nwc | A | 85 | 96 | KLKATGWDGYWV | HHHHTT--SEEE | aaaaavpaxbbb |
1nyt_A_221 | 1nyt | A | 225 | 235 | WCEQRGSKRNA. | HHHHTT--EEE. | aaaaagxabbb. |
1obb_A_42 | 1obb | A | 55 | 66 | YVEEVGADLKFE | HHHHTT---EEE | aaaaavxaxbbb |
1onr_A_201 | 1onr | A | 212 | 223 | YYKEHGYETVVM | HHHHTT---EEE | aaaaavxapxxb |
1p77_A_222 | 1p77 | A | 226 | 236 | LCKSLGLTNVS. | HHHHTT---EE. | aaaaavxaxbb. |
1qjw_A_142 | 1qjw | A | 154 | 165 | TANKNGGNYAGQ | HHHHTT--EEEE | aaaaavxaxbxb |
1qmg_A_136 | 1qmg | A | 147 | 158 | SLTEAKSDVVVK | HHHHTT---EEE | aaaaavxaxxbb |
1rhs_*_108 | 1rhs | - | 114 | 125 | MFRVFGHRTVSV | HHHHTT---EEE | aaaaavbaxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gte_A_197 | 1gte | A | AA1FAD BINDING SITE FOR CHAIN A | P - 197 |
1gte_A_197 | 1gte | A | AA1FAD BINDING SITE FOR CHAIN A | A - 198 |
1gte_A_197 | 1gte | A | AA1FAD BINDING SITE FOR CHAIN A | E - 218 |
1h2k_A_125 | 1h2k | A | SO1SO4 BINDING SITE FOR CHAIN A | R - 138 |
1h2k_A_125 | 1h2k | A | SO1SO4 BINDING SITE FOR CHAIN A | G - 140 |
1h2k_A_125 | 1h2k | A | SO1SO4 BINDING SITE FOR CHAIN A | E - 141 |
1h2k_A_125 | 1h2k | A | SO1SO4 BINDING SITE FOR CHAIN A | E - 142 |
1h2k_A_125 | 1h2k | A | SO2SO4 BINDING SITE FOR CHAIN A | R - 143 |
1h2k_A_125 | 1h2k | A | OGAOGA BINDING SITE FOR CHAIN A | Y - 145 |
1h49_A_428 | 1h49 | A | AC4BGC BINDING SITE FOR CHAIN A | W - 457 |
1obb_A_42 | 1obb | A | AC1NAD BINDING SITE FOR CHAIN A | R - 44 |
Clusters included in this Subclass |
CLUSTER: HE.4.75 |
CLUSTER: HE.5.23 |
CLUSTER: HE.6.24 |
CLUSTER: HE.6.82 |