Logo
Information on SUBCLASS 3.2.13
Subclass Accession number: 8317
Subclass: 3.2.13 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 20.0 +/- 21.2
Average RMSD (Å) : 0.700 +/- 0.265

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: XXchcGh
(φψ)-conformation: aalpaeb
Pattern: [EK][GNQ][ETY][ACV][DK][AKL]x[GN][AL][DK][G][FIV]x[FL][DGV]
Conservation:0.860-0.322-0.772-0.1720.266-0.922-0.6970.843-0.1890.2662.7520.053-1.1460.325-1.146
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1kqp_A_181kqp   A3044KQYVKKTGAKGFVLGHHHHHHHT--EEEEEaaaaaaavxaebbbx
1oao_A_2991oao   A299313EGEAKAAGAKGINLVHHHHHHTT-S-EEEEaaaaaaavxaebbxb
2ebn_*_1052ebn   -116130KNTCDLYNLDGVFFDHHHHHHHT--EEEEEaaaaaaalxaebbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kqp_A_181kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE Y - 32
1kqp_A_181kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE T - 36
1kqp_A_181kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE A - 38
1kqp_A_181kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE L - 43
1kqp_A_181kqp   A     ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE G - 44

Clusters included in this Subclass
CLUSTER: HE.4.254