Information on SUBCLASS 3.3.3 |
Subclass Accession number: 8320
Subclass: 3.3.3 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 13 Average sequence ID (%) : 9.4 +/- 12.9 Average RMSD (Å) : 0.654 +/- 0.181 Consensus geometry
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Consensus Sequence: | XppXphX |
(φψ)-conformation: | aapaabb |
Pattern: | x | [aeknqrs] | [aflmtv] | x | [aekqrst] | [dknrsty] | [DEKPQS] | [dhknry] | [CFIMTV] | x | [fgitv] |
Conservation: | -1.575 | 0.076 | 0.239 | -0.882 | 0.817 | 0.227 | 1.621 | 0.404 | 0.934 | -1.461 | -0.399 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cjc_A_61 | 1cjc | A | 66 | 76 | TQTARSDRCAF | HHHHTSTTEEE | aaaaaxaabbb |
1dmu_A_91 | 1dmu | A | 96 | 106 | RLVSQREDITV | HHHHTSTT-EE | aaaaaxaabbb |
1f6k_A_148 | 1f6k | A | 152 | 162 | GELYKNPKVLG | HHHHTSTTEEE | aaaaaxaaxae |
1fl2_A_394 | 1fl2 | A | 398 | 408 | DKLRSLKNVDI | HHHHT-TTEEE | aaaaaxaabbb |
1fnb_*_255 | 1fnb | - | 259 | 269 | WEMLKKDNTYV | HHHTTSTTEEE | aaaaaxaabbb |
1gnt_A_276 | 1gnt | A | 276 | 286 | PAFKKYPHFVG | HHHHT-TTEEE | aaaaabaaxae |
1ibj_A_387 | 1ibj | A | 392 | 402 | HLVETTKYFSI | HHHHH-SSSEE | aaaaapaabxx |
1lqt_A_64 | 1lqt | A | 68 | 78 | EKTAEDPRFRF | HHHHTSTTEEE | aaaaaxaabbb |
1odz_A_392 | 1odz | A | 397 | 406 | QAFYADEFTA. | HHHHHSTTEE. | aaaaaxaaxb. |
1ogi_A_244 | 1ogi | A | 248 | 258 | WQLIKNQKTHT | HHHHTSTTEEE | aaaaaxaaxbb |
1r6x_A_20 | 1r6x | A | 24 | 34 | LSEAQSSDILV | HHHHT-TTSEE | aaaaaxaaxxb |
1vdc_*_184 | 1vdc | - | 188 | 198 | QRALSNPKIDV | HHHHT-TTEEE | aaaaaxaabbx |
1zpd_A_30 | 1zpd | A | 34 | 44 | DNLLLNKNMEQ | HHHHT-TTSEE | aaaaaxaabbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dmu_A_91 | 1dmu | A | CACALCIUM ION | V - 98 |
1dmu_A_91 | 1dmu | A | CACALCIUM ION | S - 99 |
1dmu_A_91 | 1dmu | A | CACALCIUM ION | Q - 100 |
1dmu_A_91 | 1dmu | A | CACALCIUM ION | R - 101 |
1dmu_A_91 | 1dmu | A | CACALCIUM ION | E - 102 |
1dmu_A_91 | 1dmu | A | CACALCIUM ION | D - 103 |
1dmu_A_91 | 1dmu | A | CACALCIUM ION | I - 104 |
1dmu_A_91 | 1dmu | A | CACALCIUM ION | T - 105 |
1lqt_A_64 | 1lqt | A | ACTACETATE ION | F - 67 |
1lqt_A_64 | 1lqt | A | ACTACETATE ION | E - 68 |
1lqt_A_64 | 1lqt | A | ACTACETATE ION | A - 71 |
1lqt_A_64 | 1lqt | A | ACTACETATE ION | F - 76 |
1lqt_A_64 | 1lqt | A | ACTACETATE ION | R - 77 |
1lqt_A_64 | 1lqt | A | ACTACETATE ION | F - 78 |
Clusters included in this Subclass |
CLUSTER: HE.3.186 |
CLUSTER: HE.3.208 |
CLUSTER: HE.4.111 |
CLUSTER: HE.5.135 |
CLUSTER: HE.5.203 |