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Information on SUBCLASS 3.4.2
Subclass Accession number: 8330
Subclass: 3.4.2 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 13

Average sequence ID (%) : 15.3 +/- 21.4
Average RMSD (Å) : 0.708 +/- 0.269

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXcXphX
(φψ)-conformation: aalppbb
Pattern: [adegnq]xxxx[lvw]xxxx[deg]x[dkpqst][afimvwy]xxx
Conservation:0.299-0.8660.4430.394-1.2180.574-0.513-0.072-0.696-0.7783.164-0.777-0.0200.147-0.027-0.055-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dug_A_141dug   A1430QPTRLLLEYLEEKYEEHHHHHHHHHHHT---EEEaaaaaaaaaavxxbbbb
1e0t_A_401e0t   A4864QNLRNVMSKTGKTAAILHHHHHHHHHHT---EEEaaaaaaaaaavxbbbbx
1e9y_B_2281e9y   B232247NHALDVADKYDVQVAI.HHHHHHHHHTT-B-EE.aaaaaaaaaalbxbbb.
1ejx_C_12261ejx   C12301245DCALTVADEMDIQVAL.HHHHHHHHHHT-B-EE.aaaaaaaaaalbxbbb.
1ek6_A_471ek6   A4763ESLRRVQELTGRSVEFEHHHHHHHHHHT---EEEaaaaaaaaaavbxbxbb
1glq_A_151glq   A1531EAMRMLLADQGQSWKEEHHHHHHHHHTT---EEEaaaaaaaaaavxbbxbb
1i24_A_541i24   A5672DRISRWKALTGKSIELYHHHHHHHHHH----EEEaaaaaaaaaavxbxxbb
1l9x_A_821l9x   A91107YNLSIQSFDDGDYFPVWHHHHHHHHHTT----EEaaaaaaaaaavbxbxbb
1luc_A_1771luc   A177192ASTTEWAAERGLPMIL.HHHHHHHHHTT--BEE.aaaaaaaaaavxxbbx.
1pky_C_401pky   C4864QNLRNVMSKTGKTAAILHHHHHHHHHH----EEEaaaaaaaaaavxxbbbb
1req_B_5211req   B529545GFSSPVWHIAGIDTPQVHHHHHHHHHTT-B--EEaaaaaaaaaavxxbwbb
2gsr_A_152gsr   A1531EAMRMLLADQDQSWKEEHHHHHHHHHTT---EEEaaaaaaaaaavxbbxbb
4ubp_C_2294ubp   C233248DRSLTVADEADVQVAI.HHHHHHHHHHT-B-EE.aaaaaaaaaavbxbbb.
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e9y_B_2281e9y   B     KCXLYSINE NZ-CARBOXYLIC ACID Q - 244
1e9y_B_2281e9y   B     KCXLYSINE NZ-CARBOXYLIC ACID V - 245
1e9y_B_2281e9y   B     KCXLYSINE NZ-CARBOXYLIC ACID A - 246
1e9y_B_2281e9y   B     KCXLYSINE NZ-CARBOXYLIC ACID I - 247
1ejx_C_12261ejx   C     KCXLYSINE NZ-CARBOXYLIC ACID Q - 1242
1ejx_C_12261ejx   C     KCXLYSINE NZ-CARBOXYLIC ACID V - 1243
1ejx_C_12261ejx   C     KCXLYSINE NZ-CARBOXYLIC ACID A - 1244
1ejx_C_12261ejx   C     KCXLYSINE NZ-CARBOXYLIC ACID L - 1245
1luc_A_1771luc   A     EDO1,2-ETHANEDIOL S - 178
1luc_A_1771luc   A     EDO1,2-ETHANEDIOL T - 179
1luc_A_1771luc   A     EDO1,2-ETHANEDIOL W - 182
4ubp_C_2294ubp   C     KCXLYSINE NZ-CARBOXYLIC ACID S - 235
4ubp_C_2294ubp   C     KCXLYSINE NZ-CARBOXYLIC ACID Q - 245
4ubp_C_2294ubp   C     KCXLYSINE NZ-CARBOXYLIC ACID V - 246
4ubp_C_2294ubp   C     KCXLYSINE NZ-CARBOXYLIC ACID A - 247
4ubp_C_2294ubp   C     KCXLYSINE NZ-CARBOXYLIC ACID I - 248

Clusters included in this Subclass
CLUSTER: HE.5.38