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Information on SUBCLASS 3.4.6
Subclass Accession number: 8334
Subclass: 3.4.6 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 12.4 +/- 15.1
Average RMSD (Å) : 0.820 +/- 0.303

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: pXcXphh
(φψ)-conformation: aalppbb
Pattern: [AGKV][aes][ael]xxxx[LV]x[DKNPR][efkr][DGNR]xx[AFLPV][HLVY]x
Conservation:-0.319-0.256-0.4740.0910.159-0.282-0.2783.075-0.2380.039-0.9230.873-0.6480.582-0.9230.891-1.372
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d6j_A_381d6j   A4359VELEHQLVRDRRVHAYRHHHHHHHHTTS---EEEaaaaaaaaaaalbxbbx
1i8t_A_111i8t   A1329GAVCANELKKLNKKVLVHHHHHHHHGGGT--EEEaaaaaaaaaaavxxbbb
1j0a_A_1331j0a   A137153AEEIAEELKREGRKPYVHHHHHHHHTTSS--EEEaaaaaaaaaaaGpbbbb
1knx_A_1601knx   A160176KSECALDLINKNHLFVGHHHHHHHHHTTT-EEEEaaaaaaaaaaavxxbab
2nac_A_2012nac   A203219GLAVLRRLAPFDVHLHYHHHHHHHHGGGT-EEEEaaaaaaaaaaavxxxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d6j_A_381d6j   A     TARD(-)-TARTARIC ACID K - 38
1d6j_A_381d6j   A     TARD(-)-TARTARIC ACID S - 39
1d6j_A_381d6j   A     TARD(-)-TARTARIC ACID R - 59
1i8t_A_111i8t   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 11
1i8t_A_111i8t   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 12
1i8t_A_111i8t   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 13
1i8t_A_111i8t   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 30

Clusters included in this Subclass
CLUSTER: HE.5.168
CLUSTER: HE.6.136
CLUSTER: HE.7.107