Information on SUBCLASS 3.5.1 |
Subclass Accession number: 8339
Subclass: 3.5.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 62 Average sequence ID (%) : 11.9 +/- 14.3 Average RMSD (Å) : 0.624 +/- 0.227 Consensus geometry
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Consensus Sequence: | pXchXhX |
(φψ)-conformation: | aalbpbb |
Pattern: | x | [acfilmvy] | x | x | x | [degknqr] | x | [dehknpqrst] | [acfgilmpvwy] | x | x | x | x |
Conservation: | -0.686 | 0.929 | -0.299 | 0.743 | -0.799 | 2.306 | 0.405 | 0.571 | -1.013 | -0.760 | -0.724 | -0.673 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b4u_B_100 | 1b4u | B | 109 | 120 | SLILDEFDMTIM. | HHHHTT---EEE. | aaaaavbxxbxx. |
1b5p_A_15 | 1b5p | A | 25 | 35 | ELRRQGVDLVA.. | HHHHTT---EE.. | aaaaavxxbxx.. |
1bia_*_33 | 1bia | - | 42 | 53 | TLRDWGVDVFTV. | HHHHTT---EEE. | aaaaavxxbxbb. |
1ccw_B_187 | 1ccw | B | 203 | 214 | FYEEQGVHINRE. | HHHHTT---EEE. | aaaaavbxbxbb. |
1d3y_A_73 | 1d3y | A | 88 | 97 | QLLETDDFST... | HHHHTT--EE... | aaaaalbbbx... |
1dc1_A_247 | 1dc1 | A | 267 | 279 | KFSEKGLSPKTIF | HHHHTT---EEEE | aaaaavbbpxbbb |
1dhs_*_220 | 1dhs | - | 223 | 232 | WAQKNHIPVF... | HHHHTT--EE... | aaaaalbxbb... |
1dii_A_67 | 1dii | A | 76 | 87 | ICNEHKIPIWTI. | HHHHTT--EEEE. | aaaaalxwbbxb. |
1dug_A_14 | 1dug | A | 19 | 31 | LLEYLEEKYEEHL | HHHHHT---EEEE | aaaaavxxbbbbx |
1e6b_A_18 | 1e6b | A | 26 | 38 | ALALKGLDYEYIP | HHHHTT---EEEE | aaaaavxxbxxbx |
1egz_A_234 | 1egz | A | 243 | 255 | FMRDNNISNANWA | HHHHTT--EEEEE | aaaaalbxbbxbw |
1f05_A_147 | 1f05 | A | 156 | 168 | LEEQHGIHCNMTL | HHHHH---EEEEE | aaaaavbxbbxbl |
1f3a_A_16 | 1f3a | A | 21 | 33 | LLAAAGVEFEEKF | HHHHTT---EEEE | aaaaavbxbbbbx |
1fui_A_117 | 1fui | A | 127 | 139 | AHSQKGIPAFSIY | HHHHTT---EEEE | aaaaavbwbxbbb |
1fw1_A_15 | 1fw1 | A | 23 | 35 | ALALKGIDYKTVP | HHHHTT---EEEE | aaaaavxxbxbbx |
1g6s_A_199 | 1g6s | A | 207 | 218 | LMKTFGVEIENQ. | HHHHTT---EEE. | aaaaavbbbbxx. |
1gee_A_118 | 1gee | A | 130 | 142 | YFVENDIKGTVIN | HHHHTT---EEEE | aaaaalbxxbbbb |
1glq_A_15 | 1glq | A | 20 | 32 | LLADQGQSWKEEV | HHHHTT---EEEE | aaaaavxbbxbbx |
1gnw_A_12 | 1gnw | A | 20 | 32 | ALHEKNLDFELVH | HHHHTT---EEEE | aaaaalbxbbxxp |
1gum_A_17 | 1gum | A | 22 | 34 | VLAAAGVEFDEEF | HHHHTT---EEEE | aaaaavbxbbbbx |
1hlg_A_16 | 1hlg | A | 19 | 31 | MITYWGYPNEEYE | HHHHTT---EEEE | aaaaavbxbbbbb |
1i52_A_191 | 1i52 | A | 194 | 206 | ALEYCGFHPQLVE | HHHHTT---EEEE | aaaaavxbpxbbx |
1itw_A_521 | 1itw | A | 530 | 542 | ARIREGKDTISVT | HHHHTT---EEEE | aaaaavbbbxxbb |
1ivn_A_115 | 1ivn | A | 128 | 137 | LAKEFDVPLL... | HHHHTT--EE... | aaaaalbwbx... |
1iyh_A_16 | 1iyh | A | 21 | 33 | IFAYLDIQYEDHR | HHHHTT---EEEE | aaaaalbxbxxxb |
1j09_A_131 | 1j09 | A | 136 | 148 | ERARRGEPHVIRL | HHHHTT---EEEE | aaaaavxxbbbbx |
1j9b_A_14 | 1j9b | A | 21 | 32 | MIRNSGTEPTII. | HHHHTT---EEE. | aaaaavbxxxbb. |
1ja1_A_538 | 1ja1 | A | 549 | 561 | WLREQGKEVGETL | HHHHTT-----EE | aaaaavxxbxxbb |
1je0_A_132 | 1je0 | A | 141 | 153 | SFSKRNLKYYVGN | HHHHTT--EEEEE | aaaaalbxbbbex |
1jjf_A_233 | 1jjf | A | 242 | 254 | YCVANNINHVYWL | HHHHTT---EEEE | aaaaalbxbbbbb |
1jys_A_123 | 1jys | A | 132 | 144 | CIAELNLNAVRGL | HHHHTT--EEEEE | aaaaavbbbbxex |
1k8q_A_16 | 1k8q | A | 19 | 31 | MITYWGYPAEEYE | HHHHTT---EEEE | aaaaavxwbbxbb |
1ki9_A_16 | 1ki9 | A | 26 | 38 | KLSEEGINYKMVN | HHHTTT---EEEE | aaaaagxbxbxbx |
1l3i_A_146 | 1l3i | A | 146 | 158 | CLRDLGFDVNITE | HHHHTT---EEEE | aaaaavxxxbbbb |
1l8a_A_604 | 1l8a | A | 613 | 625 | AAGDQQARGFLIG | HHHHTT---EEEE | aaaaalxbbbbbx |
1luc_A_177 | 1luc | A | 182 | 192 | WAAERGLPMIL.. | HHHHTT--BEE.. | aaaaavxxbbx.. |
1lwd_A_236 | 1lwd | A | 238 | 250 | DFDKYKIWYEHRL | HHHHTT--EEEEE | aaaaalbbbbxbx |
1m0u_A_62 | 1m0u | A | 67 | 79 | LFAYGNQEYEDVR | HHHHHT---EEEE | aaaaalxxbxxxb |
1m7g_A_38 | 1m7g | A | 49 | 60 | LVRDRRVHAYRL. | HHHHH---EEEE. | aaaaavxxbbxb. |
1mpy_A_75 | 1mpy | A | 84 | 95 | DLMAYGCAVEQL. | HHHHHT---EEE. | aaaaagxxxbbx. |
1n2a_A_12 | 1n2a | A | 17 | 29 | TLRESGKDFTLVS | HHHHTT---EEEE | aaaaavxxbbxbx |
1nek_A_17 | 1nek | A | 25 | 36 | QISQSGQTCALL. | HHHHTT---EEE. | aaaaavbxbbbb. |
1ny1_A_81 | 1ny1 | A | 87 | 99 | VLKKHRVTGTFFV | HHHHTT---EEEE | aaaaalbxbbbxb |
1o4s_A_15 | 1o4s | A | 23 | 33 | ALIKKGEDVIN.. | HHHHTT---EE.. | aaaaavxxxxx.. |
1o98_A_317 | 1o98 | A | 320 | 332 | VLSQHGLRQLRIA | HHHHTT--EEEEE | aaaaavxxbbbbb |
1oao_A_316 | 1oao | A | 322 | 332 | VLMRQGIPLVT.. | HHHHH---EEE.. | aaaaavxxbab.. |
1oe8_A_18 | 1oe8 | A | 23 | 35 | TLVAAGVNYEDER | HHHHTT---EEEE | aaaaavbxbbxbx |
1ovm_A_444 | 1ovm | A | 447 | 459 | SMLRDKQHPIILV | HHHHTT---EEEE | aaaaalxbxbxbb |
1pd2_1_16 | 1pd2 | 1 | 21 | 33 | IFAYLDIKYEDHR | HHHHTT---EEEE | aaaaalxxbxxxb |
1pfq_A_714 | 1pfq | A | 722 | 734 | ALVDVGVDFQAMW | HHHHTT---EEEE | aaaaavbxbbbbx |
1pk9_A_131 | 1pk9 | A | 140 | 152 | AAKALGIDARVGN | HHHHTT--EEEEE | aaaaavbxbxbbx |
1pmt_*_12 | 1pmt | - | 17 | 29 | VLRETGLDFSIER | HHHHTT---EEEE | aaaaalbxbbbbx |
1pn9_A_10 | 1pn9 | A | 18 | 30 | TAAAVGVELNLKL | HHHHTT---EEEE | aaaaavxxbxxbp |
1pox_A_457 | 1pox | A | 459 | 471 | TQVQYHLPVINVV | HHHHTT---EEEE | aaaaalbwbxxbb |
1qgd_A_442 | 1qgd | A | 447 | 459 | MAALMKQRQVMVY | HHHHTT---EEEE | aaaaalbxbxbxb |
1ukf_A_240 | 1ukf | A | 250 | 262 | HYNSLNYDVACVN | HHHHTT--EEEEE | aaaaavbpxabbx |
1zpd_A_450 | 1zpd | A | 452 | 464 | QMVRLKLPVIIFL | HHHHTT---EEEE | aaaaalxwxxbxx |
2gsq_*_15 | 2gsq | - | 20 | 32 | VLAAHGEEFTDRV | HHHHTT---EEEE | aaaaavbxbxbxx |
2gsr_A_15 | 2gsr | A | 20 | 32 | LLADQDQSWKEEV | HHHHTT---EEEE | aaaaavxbbxbbx |
4uag_A_15 | 4uag | A | 23 | 35 | FFLARGVTPRVMD | HHHTTT---EEEE | aaaaavbxxbbbb |
7a3h_A_242 | 7a3h | A | 251 | 263 | FMDERNLSWANWS | HHHHTT--EEEEE | aaaaalxxbbxxw |
7aat_A_238 | 7aat | A | 242 | 254 | HFIEQGIDVVLSQ | HHHHTT---EEEE | aaaaavxxxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1oao_A_316 | 1oao | A | BC7FE BINDING SITE FOR CHAIN A | C - 317 |
Clusters included in this Subclass |
CLUSTER: HE.4.184 |
CLUSTER: HE.4.19 |
CLUSTER: HE.5.21 |
CLUSTER: HE.5.9 |
CLUSTER: HE.6.21 |
CLUSTER: HE.6.3 |