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Information on SUBCLASS 3.5.3
Subclass Accession number: 8341
Subclass: 3.5.3 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 16.7 +/- 23.7
Average RMSD (Å) : 0.900 +/- 0.082

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXGXXXX
(φψ)-conformation: aalbpbb
Pattern: [AGKT][ILT]xx[AQ]x[AEL][ACIM][AER][DHS]x[AFT][DG]xx[AQT][KLV][ILV]x[ACV][ARS]
Conservation:-0.8930.445-1.0550.2631.002-0.911-1.126-0.248-0.1710.597-0.703-0.1712.728-0.812-0.1310.044-0.4292.003-1.0550.5660.056
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bol_A_1631bol   A163183ATEMQSAIESYFGAKAKIDCSHHHHHHHHHHHHSS--EEEEEaaaaaaaaaaaavbxbbbbbb
1f8m_A_2021f8m   A208228TLTSARLAADVADVPTVVIARHHHHHHHHHHHTT---EEEEEaaaaaaaaaaaavbwpxbbbb
1igw_B_2061igw   B212232KLVAARLCADVTGVPTLLVARHHHHHHHHHHHHT---EEEEEaaaaaaaaaaaavbwpxbbxb
1p5h_A_1691p5h   A179199GILAALEMRHKTGRGQKVAVAHHHHHHHHHHHHS---EEEEEaaaaaaaaaaaavbxbxbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f8m_A_2021f8m   A     MGMAGNESIUM ION R - 228
1f8m_A_2021f8m   A     PYRPYRUVIC ACID R - 228
1igw_B_2061igw   B     HGMERCURY (II) ION Q - 207
1igw_B_2061igw   B     HGMERCURY (II) ION E - 208
1igw_B_2061igw   B     HGMERCURY (II) ION L - 218
1igw_B_2061igw   B     HGMERCURY (II) ION C - 219
1igw_B_2061igw   B     HGMERCURY (II) ION A - 220
1igw_B_2061igw   B     HGMERCURY (II) ION V - 222
1igw_B_2061igw   B     HGMERCURY (II) ION T - 223
1igw_B_2061igw   B     MO3MAGNESIUM ION, 3 WATERS COORDINATED R - 232
1igw_B_2061igw   B     PYRPYRUVIC ACID R - 232

Clusters included in this Subclass
CLUSTER: HE.5.145