Information on SUBCLASS 3.5.3 |
Subclass Accession number: 8341
Subclass: 3.5.3 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 16.7 +/- 23.7 Average RMSD (Å) : 0.900 +/- 0.082 Consensus geometry
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Consensus Sequence: | XXGXXXX |
(φψ)-conformation: | aalbpbb |
Pattern: | [AGKT] | [ILT] | x | x | [AQ] | x | [AEL] | [ACIM] | [AER] | [DHS] | x | [AFT] | [DG] | x | x | [AQT] | [KLV] | [ILV] | x | [ACV] | [ARS] |
Conservation: | -0.893 | 0.445 | -1.055 | 0.263 | 1.002 | -0.911 | -1.126 | -0.248 | -0.171 | 0.597 | -0.703 | -0.171 | 2.728 | -0.812 | -0.131 | 0.044 | -0.429 | 2.003 | -1.055 | 0.566 | 0.056 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bol_A_163 | 1bol | A | 163 | 183 | ATEMQSAIESYFGAKAKIDCS | HHHHHHHHHHHHSS--EEEEE | aaaaaaaaaaaavbxbbbbbb |
1f8m_A_202 | 1f8m | A | 208 | 228 | TLTSARLAADVADVPTVVIAR | HHHHHHHHHHHTT---EEEEE | aaaaaaaaaaaavbwpxbbbb |
1igw_B_206 | 1igw | B | 212 | 232 | KLVAARLCADVTGVPTLLVAR | HHHHHHHHHHHHT---EEEEE | aaaaaaaaaaaavbwpxbbxb |
1p5h_A_169 | 1p5h | A | 179 | 199 | GILAALEMRHKTGRGQKVAVA | HHHHHHHHHHHHS---EEEEE | aaaaaaaaaaaavbxbxbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f8m_A_202 | 1f8m | A | MGMAGNESIUM ION | R - 228 |
1f8m_A_202 | 1f8m | A | PYRPYRUVIC ACID | R - 228 |
1igw_B_206 | 1igw | B | HGMERCURY (II) ION | Q - 207 |
1igw_B_206 | 1igw | B | HGMERCURY (II) ION | E - 208 |
1igw_B_206 | 1igw | B | HGMERCURY (II) ION | L - 218 |
1igw_B_206 | 1igw | B | HGMERCURY (II) ION | C - 219 |
1igw_B_206 | 1igw | B | HGMERCURY (II) ION | A - 220 |
1igw_B_206 | 1igw | B | HGMERCURY (II) ION | V - 222 |
1igw_B_206 | 1igw | B | HGMERCURY (II) ION | T - 223 |
1igw_B_206 | 1igw | B | MO3MAGNESIUM ION, 3 WATERS COORDINATED | R - 232 |
1igw_B_206 | 1igw | B | PYRPYRUVIC ACID | R - 232 |
Clusters included in this Subclass |
CLUSTER: HE.5.145 |