Information on SUBCLASS 9.2.1 |
Subclass Accession number: 835
Subclass: 9.2.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.7 (>75 %) 2.7.7 (>75 %) 2.7.7.76.3 (>75 %) 6.3.2 (>75 %) 6.3.2.19 GO : GO:0003677 (>75 %) GO:0003887 (>75 %) GO:0004518 (>75 %) GO:0004527 (>75 %) GO:0004840 (>75 %) GO:0004842 (>75 %) GO:0005489 (>75 %) GO:0005507 (>75 %) GO:0008639 (>75 %) GO:0016772 (>75 %) GO:0016779 (>75 %) GO:0016788 (>75 %) GO:0016874 (>75 %) GO:0016879 (>75 %) GO:0016881 (>75 %) GO:0046914 (>75 %) SCOP : 49502 (>75 %) 49503 (>75 %) 49504 (>75 %) 54494 (>75 %) 54495 (>75 %) 54496 (>75 %) 56671 (>75 %) 56672 (>75 %) 56673 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 33.3 +/- 24.0 Average RMSD (Å) : 0.875 +/- 0.386 Consensus geometry
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Consensus Sequence: | hXXXXXhpGRhXX |
(φψ)-conformation: | bbaaapaagppbb |
Pattern: | x | [FVY] | [HNP] | [PQ] | [AEN] | x | [AT] | x | [DT] | [G] | [R] | [ALP] | [GST] | x | [AT] |
Conservation: | -0.802 | -0.120 | -0.049 | 0.434 | -0.581 | -1.343 | 0.447 | -0.883 | 0.301 | 2.303 | 1.737 | -0.818 | -0.238 | -0.834 | 0.447 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ftr_A_53 | 1ftr | A | 60 | 74 | YVPPEETPDGRPGVT | EE-GGGSTTSS-EEE | bbxaaabaavbxbbb |
1kfs_A_658 | 1kfs | A | 658 | 672 | SYHQAVTATGRLSST | EEESS--SSS--EEE | xxbaaaxaagxxbbb |
1nk4_A_605 | 1nk4 | A | 605 | 619 | IFNQALTQTGRLSST | EEESS--SSS--EEE | bxxaaaxaagxbbbb |
1t7p_A_419 | 1t7p | A | 419 | 433 | SVNPNGAVTGRATHA | EEETT-STTS--EEE | xbxaaaxaagxxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kfs_A_658 | 1kfs | A | ZNZINC ION | R - 668 |
1nk4_A_605 | 1nk4 | A | SUCSUCROSE | I - 605 |
1nk4_A_605 | 1nk4 | A | SUCSUCROSE | F - 606 |
1nk4_A_605 | 1nk4 | A | SUCSUCROSE | N - 607 |
1nk4_A_605 | 1nk4 | A | SUCSUCROSE | Q - 608 |
1nk4_A_605 | 1nk4 | A | SUCSUCROSE | A - 609 |
1nk4_A_605 | 1nk4 | A | SUCSUCROSE | L - 610 |
1nk4_A_605 | 1nk4 | A | SUCSUCROSE | T - 619 |
1t7p_A_419 | 1t7p | A | 2DA2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE | R - 429 |
1t7p_A_419 | 1t7p | A | DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE | R - 429 |
Clusters included in this Subclass |
CLUSTER: HA.9.13 |