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Information on SUBCLASS 9.2.1
Subclass Accession number: 835
Subclass: 9.2.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.7 (>75 %)  2.7.7 (>75 %)  2.7.7.76.3 (>75 %)  6.3.2 (>75 %)  6.3.2.19
GO : GO:0003677 (>75 %)  GO:0003887 (>75 %)  GO:0004518 (>75 %)  GO:0004527 (>75 %)  GO:0004840 (>75 %)  GO:0004842 (>75 %)  GO:0005489 (>75 %)  GO:0005507 (>75 %)  GO:0008639 (>75 %)  GO:0016772 (>75 %)  GO:0016779 (>75 %)  GO:0016788 (>75 %)  GO:0016874 (>75 %)  GO:0016879 (>75 %)  GO:0016881 (>75 %)  GO:0046914 (>75 %)  
SCOP : 49502 (>75 %)  49503 (>75 %)  49504 (>75 %)  54494 (>75 %)  54495 (>75 %)  54496 (>75 %)  56671 (>75 %)  56672 (>75 %)  56673 (>75 %)  
Number of loops: 4

Average sequence ID (%) : 33.3 +/- 24.0
Average RMSD (Å) : 0.875 +/- 0.386

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hXXXXXhpGRhXX
(φψ)-conformation: bbaaapaagppbb
Pattern: x[FVY][HNP][PQ][AEN]x[AT]x[DT][G][R][ALP][GST]x[AT]
Conservation:-0.802-0.120-0.0490.434-0.581-1.3430.447-0.8830.3012.3031.737-0.818-0.238-0.8340.447
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ftr_A_531ftr   A6074YVPPEETPDGRPGVTEE-GGGSTTSS-EEEbbxaaabaavbxbbb
1kfs_A_6581kfs   A658672SYHQAVTATGRLSSTEEESS--SSS--EEExxbaaaxaagxxbbb
1nk4_A_6051nk4   A605619IFNQALTQTGRLSSTEEESS--SSS--EEEbxxaaaxaagxbbbb
1t7p_A_4191t7p   A419433SVNPNGAVTGRATHAEEETT-STTS--EEExbxaaaxaagxxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kfs_A_6581kfs   A     ZNZINC ION R - 668
1nk4_A_6051nk4   A     SUCSUCROSE I - 605
1nk4_A_6051nk4   A     SUCSUCROSE F - 606
1nk4_A_6051nk4   A     SUCSUCROSE N - 607
1nk4_A_6051nk4   A     SUCSUCROSE Q - 608
1nk4_A_6051nk4   A     SUCSUCROSE A - 609
1nk4_A_6051nk4   A     SUCSUCROSE L - 610
1nk4_A_6051nk4   A     SUCSUCROSE T - 619
1t7p_A_4191t7p   A     2DA2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE R - 429
1t7p_A_4191t7p   A     DG32'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE R - 429

Clusters included in this Subclass
CLUSTER: HA.9.13