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Information on SUBCLASS 3.9.1
Subclass Accession number: 8358
Subclass: 3.9.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 12.3 +/- 13.1
Average RMSD (Å) : 0.600 +/- 0.100

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XXXGXXX
(φψ)-conformation: aaplpbb
Pattern: x[aeqr][ALVW]x[AGK]xxx[GN]xx[ltv]x
Conservation:-0.957-0.226-0.056-0.5050.6810.250-0.261-0.6092.866-0.365-0.663-0.155-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ad3_A_2871ad3   A291303QRVKGLIDNQKVAHHHHHTTTTS-EEaaaaaaaplbxxa
1aug_A_201aug   A2233WEAVKRLNGAAE.HHHHHTTTT-EE.aaaaaaaxvxbb.
1avq_A_221avq   A2233DAWHKLRLGVIT.HHHHHTTTT-EE.aaaaaaapvxxb.
1euc_B_731euc   B7789GQLAKQMIGYNLAHHHHHTTTTSEEEaaaaaaaxvxbbb
1ses_A_2271ses   A228240VVLNALHSGEILPHHHHHTTTT-EEEaaaaaaaxvbbxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ad3_A_2871ad3   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE R - 288
1ad3_A_2871ad3   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE H - 289
1ad3_A_2871ad3   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE R - 292
1avq_A_221avq   A     PO4PHOSPHATE ION W - 24
1avq_A_221avq   A     PO4PHOSPHATE ION R - 28
1avq_A_221avq   A     PO4PHOSPHATE ION T - 33
1ses_A_2271ses   A     AHXSERYL-HYDROXAMATE-ADENOSINE MONOPHOSPHATE E - 227

Clusters included in this Subclass
CLUSTER: HE.5.107