Information on SUBCLASS 3.9.1 |
Subclass Accession number: 8358
Subclass: 3.9.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 12.3 +/- 13.1 Average RMSD (Å) : 0.600 +/- 0.100 Consensus geometry
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Consensus Sequence: | XXXGXXX |
(φψ)-conformation: | aaplpbb |
Pattern: | x | [aeqr] | [ALVW] | x | [AGK] | x | x | x | [GN] | x | x | [ltv] | x |
Conservation: | -0.957 | -0.226 | -0.056 | -0.505 | 0.681 | 0.250 | -0.261 | -0.609 | 2.866 | -0.365 | -0.663 | -0.155 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ad3_A_287 | 1ad3 | A | 291 | 303 | QRVKGLIDNQKVA | HHHHHTTTTS-EE | aaaaaaaplbxxa |
1aug_A_20 | 1aug | A | 22 | 33 | WEAVKRLNGAAE. | HHHHHTTTT-EE. | aaaaaaaxvxbb. |
1avq_A_22 | 1avq | A | 22 | 33 | DAWHKLRLGVIT. | HHHHHTTTT-EE. | aaaaaaapvxxb. |
1euc_B_73 | 1euc | B | 77 | 89 | GQLAKQMIGYNLA | HHHHHTTTTSEEE | aaaaaaaxvxbbb |
1ses_A_227 | 1ses | A | 228 | 240 | VVLNALHSGEILP | HHHHHTTTT-EEE | aaaaaaaxvbbxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ad3_A_287 | 1ad3 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | R - 288 |
1ad3_A_287 | 1ad3 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | H - 289 |
1ad3_A_287 | 1ad3 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | R - 292 |
1avq_A_22 | 1avq | A | PO4PHOSPHATE ION | W - 24 |
1avq_A_22 | 1avq | A | PO4PHOSPHATE ION | R - 28 |
1avq_A_22 | 1avq | A | PO4PHOSPHATE ION | T - 33 |
1ses_A_227 | 1ses | A | AHXSERYL-HYDROXAMATE-ADENOSINE MONOPHOSPHATE | E - 227 |
Clusters included in this Subclass |
CLUSTER: HE.5.107 |