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Information on SUBCLASS 3.12.1
Subclass Accession number: 8367
Subclass: 3.12.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 12

Average sequence ID (%) : 30.4 +/- 26.0
Average RMSD (Å) : 0.558 +/- 0.227

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hXpXGXh
(φψ)-conformation: aappebp
Pattern: [ekmr]x[agsv][ailmvy]x[fiwy]x[filmw][alt]xx[g][iktv][kp][aciklv][ilmv][fqy]
Conservation:-0.025-0.824-0.788-0.274-0.4690.151-0.8540.079-0.384-0.653-0.5593.125-0.6510.636-0.4510.7751.166
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ava_A_3041ava   A305321MQGYAYILTHPGTPCIFHHHHHHHHHSSSEEEEEaaaaaaaaaxxebxbxx
1bf2_*_5551bf2   -563579RTGMAFEMLSAGTPLMQHHHHHHHHHSSSEEEEEaaaaaaaaaxxebxbbx
1d3c_A_3391d3c   A343359EQALAFTLTSRGVPAIYHHHHHHHHTSSSEEEEEaaaaaaaaaxxebwbbx
1gcy_A_3151gcy   A316332RQAYAYILTSPGTPVVYHHHHHHHHHSSSEEEEEaaaaaaaaabxebxbbx
1ji2_A_4331ji2   A437453RLAVLFQMTYLGTPLIYHHHHHHHHHSSSEEEEEaaaaaaaaaxxexwbxx
1kmv_A_1181kmv   A118134SSVYKEAMNHPGHLKLFHHHHHHHHTS-S-EEEEaaaaaaaaaxxexbbbx
1lwj_A_2911lwj   A295311KLSISILFTLPGVPLVFHHHHHHHHTSSSEEEEEaaaaaaaaabxebwbbx
1m7x_A_5431m7x   A551567RAYYGWMWAFPGKKLLFHHHHHHHHHSSSEEEEEaaaaaaaaaxpexbbbx
1p6w_A_3061p6w   A307323MQGYAYILTHPGIPCIFHHHHHHHHHSSSEEEEEaaaaaaaaaxxebxbxx
1pam_A_3391pam   A343359EQALAFTLTSRGVPAIYHHHHHHHHHSSSEEEEEaaaaaaaaaxxebwbbx
2aaa_*_3082aaa   -312328KNVLSYIFLSDGIPIVYHHHHHHHHHSSSEEEEEaaaaaaaaaxxexwbbx
7taa_*_3087taa   -312328KNVAAFIILNDGIPIIYHHHHHHHHHSSSEEEEEaaaaaaaaaxxebwbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kmv_A_1181kmv   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 118
1kmv_A_1181kmv   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 119
1kmv_A_1181kmv   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 120
1kmv_A_1181kmv   A     LII(Z)-6-(2-[2,5-DIMETHOXYPHENYL]ETHEN-1-YL)-2,4-DIAMINO-5-METHYLPYRIDO[2,3-D]PYRIMIDINE Y - 121
1kmv_A_1181kmv   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Y - 121
1kmv_A_1181kmv   A     DMSDIMETHYL SULFOXIDE Y - 121
1kmv_A_1181kmv   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE E - 123
1kmv_A_1181kmv   A     LII(Z)-6-(2-[2,5-DIMETHOXYPHENYL]ETHEN-1-YL)-2,4-DIAMINO-5-METHYLPYRIDO[2,3-D]PYRIMIDINE F - 134
1kmv_A_1181kmv   A     LII(Z)-6-(2-[2,5-DIMETHOXYPHENYL]ETHEN-1-YL)-2,4-DIAMINO-5-METHYLPYRIDO[2,3-D]PYRIMIDINE T - 136

Clusters included in this Subclass
CLUSTER: HE.4.60