Information on SUBCLASS 3.13.2 |
Subclass Accession number: 8370
Subclass: 3.13.2 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 25.0 +/- 21.7 Average RMSD (Å) : 0.525 +/- 0.183 Consensus geometry
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Consensus Sequence: | XhGcpph |
(φψ)-conformation: | aaeapbb |
Pattern: | x | [AEK] | x | [ILV] | [G] | [DGKN] | [ADGQRST] | [dkrst] | [CVWY] | [adeq] |
Conservation: | -0.993 | 0.141 | -0.833 | 0.854 | 2.389 | 0.166 | -0.576 | -0.594 | -0.254 | -0.299 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dhr_*_56 | 1dhr | - | 68 | 77 | GKLLGDQKVD | HHHHTT--EE | aaaaeaxbba |
1e6v_A_193 | 1e6v | A | 200 | 209 | IKAIGNRTYQ | HHHH-S-EEE | aaaaeabbbb |
1e6y_A_1204 | 1e6y | A | 1211 | 1220 | KASIGKTSWQ | HHHH-S-EEE | aaaaeabbbb |
1ej0_A_103 | 1ej0 | A | 110 | 119 | LERVGDSKVQ | HHHHTT--EE | aaaaeaxxba |
1gpm_A_210 | 1gpm | A | 222 | 231 | REQVGDDKVI | HHHHTT-EEE | aaaaeaxxbb |
1h5r_A_97 | 1h5r | A | 97 | 106 | EEFIGGDDCA | HHHHTTS-EE | aaaaeaxxbb |
1hbn_A_190 | 1hbn | A | 197 | 206 | KAEVGDGIWQ | HHHHTT-EEE | aaaaeapbbx |
1js1_X_211 | 1js1 | X | 211 | 220 | PKFVGNARVE | HHHHTT-EEE | aaaaeaxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dhr_*_56 | 1dhr | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | Q - 59 |
1dhr_*_56 | 1dhr | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | C - 81 |
1ej0_A_103 | 1ej0 | A | HGMERCURY (II) ION | V - 105 |
1ej0_A_103 | 1ej0 | A | HGMERCURY (II) ION | L - 109 |
1gpm_A_210 | 1gpm | A | AMPADENOSINE MONOPHOSPHATE | L - 232 |
1gpm_A_210 | 1gpm | A | POPPYROPHOSPHATE 2- | G - 233 |
1gpm_A_210 | 1gpm | A | AMPADENOSINE MONOPHOSPHATE | G - 233 |
1h5r_A_97 | 1h5r | A | THMTHYMIDINE | L - 109 |
1h5r_A_97 | 1h5r | A | G1PALPHA-D-GLUCOSE-1-PHOSPHATE | L - 109 |
Clusters included in this Subclass |
CLUSTER: HE.3.90 |
CLUSTER: HE.4.309 |