Information on SUBCLASS 3.21.1 |
Subclass Accession number: 8386
Subclass: 3.21.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 11.7 +/- 15.9 Average RMSD (Å) : 1.060 +/- 0.114 Consensus geometry
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Consensus Sequence: | pphhXXh |
(φψ)-conformation: | aapapbb |
Pattern: | [alvy] | x | [DEQY] | [nqrs] | [ACV] | [ADP] | [AEK] | [fhkr] | [FLV] | [IMV] | [afl] | [cglv] |
Conservation: | -0.726 | -1.033 | 0.354 | -0.611 | 1.036 | 0.972 | 0.391 | -0.995 | 0.668 | 1.750 | -0.349 | -1.455 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bkj_A_69 | 1bkj | A | 69 | 80 | YVESAAEFLVFC | HHHHSSEEEEEE | aaaaxabbbbxb |
1c9k_A_104 | 1c9k | A | 121 | 132 | ACQRCPAKVVLV | HHHH--SEEEEE | aaaaxaxxbbbb |
1gg4_A_83 | 1gg4 | A | 94 | 105 | VRQQVPARVVAL | HHHHS--EEEEE | aaaabapxxbbb |
1iye_A_245 | 1iye | A | 245 | 256 | SLYLADEVFMSG | HHHH-SEEEEEE | aaaaxabbbbbe |
1n2s_A_127 | 1n2s | A | 139 | 150 | LQDNCPKHLIFR | HHHH-SSEEEEE | aaaabaxbbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bkj_A_69 | 1bkj | A | FMNFLAVIN MONONUCLEOTIDE | Y - 69 |
1c9k_A_104 | 1c9k | A | PO4PHOSPHATE ION | V - 132 |
1gg4_A_83 | 1gg4 | A | MSESELENOMETHIONINE | F - 87 |
1gg4_A_83 | 1gg4 | A | MSESELENOMETHIONINE | L - 90 |
1gg4_A_83 | 1gg4 | A | MSESELENOMETHIONINE | A - 91 |
1gg4_A_83 | 1gg4 | A | MSESELENOMETHIONINE | V - 94 |
1iye_A_245 | 1iye | A | PGU4-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-BUTYRIC ACID | S - 255 |
1iye_A_245 | 1iye | A | PGU4-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-BUTYRIC ACID | G - 256 |
1n2s_A_127 | 1n2s | A | NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE | Y - 128 |
1n2s_A_127 | 1n2s | A | NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE | K - 132 |
1n2s_A_127 | 1n2s | A | NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE | T - 151 |
Clusters included in this Subclass |
CLUSTER: HE.2.72 |