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Information on SUBCLASS 3.21.1
Subclass Accession number: 8386
Subclass: 3.21.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 11.7 +/- 15.9
Average RMSD (Å) : 1.060 +/- 0.114

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: pphhXXh
(φψ)-conformation: aapapbb
Pattern: [alvy]x[DEQY][nqrs][ACV][ADP][AEK][fhkr][FLV][IMV][afl][cglv]
Conservation:-0.726-1.0330.354-0.6111.0360.9720.391-0.9950.6681.750-0.349-1.455
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bkj_A_691bkj   A6980YVESAAEFLVFCHHHHSSEEEEEEaaaaxabbbbxb
1c9k_A_1041c9k   A121132ACQRCPAKVVLVHHHH--SEEEEEaaaaxaxxbbbb
1gg4_A_831gg4   A94105VRQQVPARVVALHHHHS--EEEEEaaaabapxxbbb
1iye_A_2451iye   A245256SLYLADEVFMSGHHHH-SEEEEEEaaaaxabbbbbe
1n2s_A_1271n2s   A139150LQDNCPKHLIFRHHHH-SSEEEEEaaaabaxbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bkj_A_691bkj   A     FMNFLAVIN MONONUCLEOTIDE Y - 69
1c9k_A_1041c9k   A     PO4PHOSPHATE ION V - 132
1gg4_A_831gg4   A     MSESELENOMETHIONINE F - 87
1gg4_A_831gg4   A     MSESELENOMETHIONINE L - 90
1gg4_A_831gg4   A     MSESELENOMETHIONINE A - 91
1gg4_A_831gg4   A     MSESELENOMETHIONINE V - 94
1iye_A_2451iye   A     PGU4-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-BUTYRIC ACID S - 255
1iye_A_2451iye   A     PGU4-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-BUTYRIC ACID G - 256
1n2s_A_1271n2s   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 128
1n2s_A_1271n2s   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE K - 132
1n2s_A_1271n2s   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 151

Clusters included in this Subclass
CLUSTER: HE.2.72