Information on SUBCLASS 3.37.1 |
Subclass Accession number: 8404
Subclass: 3.37.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 2 Average sequence ID (%) : 15.0 +/- 0.0 Average RMSD (Å) : 0.900 +/- 0.000 Consensus geometry
|
Consensus Sequence: | XLpPphp |
(φψ)-conformation: | aapwabb |
Pattern: | [AK] | [TV] | [AT] | [EQ] | [AC] | x | [IY] | [L] | [AY] | [EK] | [AK] | [L] | [QR] | [P] | [NR] | [CL] | [KR] | [AL] | [EL] | [KY] |
Conservation: | -0.728 | -0.354 | -0.354 | 0.578 | 0.392 | -0.914 | -0.354 | 0.952 | -0.728 | 0.205 | -0.728 | 0.952 | 0.205 | 3.190 | 0.019 | 0.019 | 0.578 | -0.914 | -1.474 | -0.541 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1h4v_B_338 | 1h4v | B | 340 | 359 | AVAEAFYLAEALRPRLRAEY | HHHHHHHHHHHHTTTS-EEE | aaaaaaaaaaaaxwabxbbb |
3tmk_A_18 | 3tmk | A | 18 | 37 | KTTQCNILYKKLQPNCKLLK | HHHHHHHHHHHH-SSEEEEE | aaaaaaaaaaaaxwabbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
3tmk_A_18 | 3tmk | A | T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE | K - 18 |
3tmk_A_18 | 3tmk | A | T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE | T - 19 |
3tmk_A_18 | 3tmk | A | T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE | T - 20 |
3tmk_A_18 | 3tmk | A | T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE | Q - 21 |
3tmk_A_18 | 3tmk | A | T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE | K - 37 |
Clusters included in this Subclass |
CLUSTER: HE.4.304 |