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Information on SUBCLASS 4.1.8
Subclass Accession number: 8413
Subclass: 4.1.8 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 21.2 +/- 30.6
Average RMSD (Å) : 0.560 +/- 0.195

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: pXXPphph
(φψ)-conformation: aabaappb
Pattern: xxxxxxxxxxxxxxxx
Conservation:-0.014-0.421-0.459-0.307-0.437-0.307-0.610-0.6103.3960.033-0.3760.682-0.094-0.459-0.7610.744
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8u_A_2371a8u   A237252ARVFHKALPSAEYVEVHHHHHHHSTTSEEEEEaaaaaaabaaxxbbbx
1brt_*_2371brt   -237252ARVFHKALPSAEYVEVHHHHHHH-TTSEEEEEaaaaaaabaaxxbbbb
1fp2_A_2011fp2   A203218AKIICETFPKLKCIVFHHHHHHH-TT-EEEEEaaaaaaabaaxxbbxb
1nhp_*_101nhp   -1631VEELLNLHPDAEIQWYHHHHHHH-TTSEEEEEaaaaaaabaaxxbbbb
1qfj_A_1141qfj   A121136LLTALARNPNRDITIYHHHHHHH-TT--EEEEaaaaaaabaapxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fp2_A_2011fp2   A     SAHS-ADENOSYL-L-HOMOCYSTEINE T - 202
1fp2_A_2011fp2   A     SAHS-ADENOSYL-L-HOMOCYSTEINE F - 218
1fp2_A_2011fp2   A     SAHS-ADENOSYL-L-HOMOCYSTEINE D - 219
1nhp_*_101nhp   *     FADFLAVIN-ADENINE DINUCLEOTIDE H - 10
1nhp_*_101nhp   *     FADFLAVIN-ADENINE DINUCLEOTIDE G - 11
1nhp_*_101nhp   *     FADFLAVIN-ADENINE DINUCLEOTIDE G - 12
1nhp_*_101nhp   *     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 31
1nhp_*_101nhp   *     FADFLAVIN-ADENINE DINUCLEOTIDE E - 32

Clusters included in this Subclass
CLUSTER: HE.3.199
CLUSTER: HE.4.179