Information on SUBCLASS 4.2.7 |
Subclass Accession number: 8423
Subclass: 4.2.7 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 13.3 +/- 14.5 Average RMSD (Å) : 0.680 +/- 0.130 Consensus geometry
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Consensus Sequence: | ppGXhpXh |
(φψ)-conformation: | aalababb |
Pattern: | [AGLM] | [ACFM] | [AEKNR] | [NQRTY] | [GN] | x | [AFILT] | [DKR] | x | [ILP] | [AIMVY] | [gil] |
Conservation: | -0.486 | -0.045 | -0.069 | -0.420 | 2.926 | -0.376 | -0.459 | 0.553 | -0.276 | -0.118 | -0.108 | -1.122 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dfm_A_145 | 1dfm | A | 155 | 166 | LAEYNVFDVPIR | HHHTT---S-EE | aaaalabaxwbx |
1ldn_A_30 | 1ldn | A | 39 | 50 | LMNQGIADEIVL | HHHHT--SEEEE | aaaavababbbb |
1li4_A_158 | 1li4 | A | 167 | 178 | MMANGILKVPAI | HHHTT---SEEE | aaaavapabxbb |
1n62_B_456 | 1n62 | B | 469 | 480 | AFKRGETREIMG | HHHTTS-SEEEE | aaaavabaxbbb |
1oyw_A_110 | 1oyw | A | 110 | 121 | GCRTGQIRLLYI | HHHHT--SEEEE | aaaavababbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HE.4.255 |
CLUSTER: HE.5.225 |
CLUSTER: HE.6.187 |