Information on SUBCLASS 4.3.3 |
Subclass Accession number: 8428
Subclass: 4.3.3 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 18.2 +/- 18.5 Average RMSD (Å) : 0.600 +/- 0.267 Consensus geometry
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Consensus Sequence: | pXchchXX |
(φψ)-conformation: | aalpappb |
Pattern: | [ailtv] | [acptv] | x | x | x | [DEG] | [ltvy] | [DKNR] | [agv] | [epr] | x | [fgiv] |
Conservation: | 0.060 | -0.552 | -0.872 | -0.420 | -0.667 | 2.459 | 0.077 | 1.525 | -0.645 | 0.020 | -0.371 | -0.614 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e5m_A_145 | 1e5m | A | 150 | 161 | TAINLGAKGPNN | HHHHHT--S-EE | aaaaavxaxpbb |
1e6u_A_253 | 1e6u | A | 260 | 271 | IAKVVGYKGRVV | HHHHHT--SEEE | aaaaavxaxbxb |
1euc_B_334 | 1euc | B | 342 | 353 | ACRELELKVPLV | HHHHHT--S-EE | aaaaalxaxxbb |
1kas_*_141 | 1kas | - | 146 | 157 | LTIMYGLRGPSI | HHHHHT--S-EE | aaaaavxaxpbb |
1nn4_A_90 | 1nn4 | A | 96 | 107 | SRQHNDTNVLAF | HHHHH---EEEE | aaaaalxabbbb |
1qs0_B_231 | 1qs0 | B | 238 | 249 | AAEESGVDAEVI | HHHHH----EEE | aaaaagpaxxxb |
2scu_B_325 | 2scu | B | 335 | 346 | AVAEVGVNVPVV | HHHHHT--S-EE | aaaaavxabpbb |
4ubp_C_504 | 4ubp | C | 504 | 515 | VPAKLGLKRRIG | HHHHHT--SEEE | aaaaavxaxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1euc_B_334 | 1euc | B | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | I - 334 |
1euc_B_334 | 1euc | B | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | I - 335 |
1euc_B_334 | 1euc | B | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | A - 336 |
1euc_B_334 | 1euc | B | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | N - 337 |
1euc_B_334 | 1euc | B | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | L - 356 |
1euc_B_334 | 1euc | B | CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE | E - 357 |
1qs0_B_231 | 1qs0 | B | MSESELENOMETHIONINE | V - 244 |
1qs0_B_231 | 1qs0 | B | MSESELENOMETHIONINE | D - 245 |
1qs0_B_231 | 1qs0 | B | MSESELENOMETHIONINE | D - 250 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e6u_A_253 | 1e6u | A | AC2UVW BINDING SITE FOR CHAIN A | K - 262 |
Clusters included in this Subclass |
CLUSTER: HE.4.140 |
CLUSTER: HE.4.269 |
CLUSTER: HE.5.117 |
CLUSTER: HE.6.177 |