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Information on SUBCLASS 4.3.3
Subclass Accession number: 8428
Subclass: 4.3.3 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 18.2 +/- 18.5
Average RMSD (Å) : 0.600 +/- 0.267

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: pXchchXX
(φψ)-conformation: aalpappb
Pattern: [ailtv][acptv]xxx[DEG][ltvy][DKNR][agv][epr]x[fgiv]
Conservation:0.060-0.552-0.872-0.420-0.6672.4590.0771.525-0.6450.020-0.371-0.614
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e5m_A_1451e5m   A150161TAINLGAKGPNNHHHHHT--S-EEaaaaavxaxpbb
1e6u_A_2531e6u   A260271IAKVVGYKGRVVHHHHHT--SEEEaaaaavxaxbxb
1euc_B_3341euc   B342353ACRELELKVPLVHHHHHT--S-EEaaaaalxaxxbb
1kas_*_1411kas   -146157LTIMYGLRGPSIHHHHHT--S-EEaaaaavxaxpbb
1nn4_A_901nn4   A96107SRQHNDTNVLAFHHHHH---EEEEaaaaalxabbbb
1qs0_B_2311qs0   B238249AAEESGVDAEVIHHHHH----EEEaaaaagpaxxxb
2scu_B_3252scu   B335346AVAEVGVNVPVVHHHHHT--S-EEaaaaavxabpbb
4ubp_C_5044ubp   C504515VPAKLGLKRRIGHHHHHT--SEEEaaaaavxaxxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1euc_B_3341euc   B     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE I - 334
1euc_B_3341euc   B     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE I - 335
1euc_B_3341euc   B     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE A - 336
1euc_B_3341euc   B     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE N - 337
1euc_B_3341euc   B     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE L - 356
1euc_B_3341euc   B     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE E - 357
1qs0_B_2311qs0   B     MSESELENOMETHIONINE V - 244
1qs0_B_2311qs0   B     MSESELENOMETHIONINE D - 245
1qs0_B_2311qs0   B     MSESELENOMETHIONINE D - 250
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e6u_A_2531e6u   A AC2UVW BINDING SITE FOR CHAIN AK - 262

Clusters included in this Subclass
CLUSTER: HE.4.140
CLUSTER: HE.4.269
CLUSTER: HE.5.117
CLUSTER: HE.6.177