Information on SUBCLASS 4.5.1 |
Subclass Accession number: 8436
Subclass: 4.5.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 15 Average sequence ID (%) : 12.7 +/- 19.3 Average RMSD (Å) : 1.240 +/- 0.250 Consensus geometry
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Consensus Sequence: | XpXXphXX |
(φψ)-conformation: | aapaapbb |
Pattern: | [fgikltv] | x | [aept] | x | [aekrs] | x | x | x | [aegnst] | [dehny] | x | [KPQT] | [degknqs] | [AFGILMTV] | [knpst] | x | x |
Conservation: | -1.445 | -1.057 | 0.474 | -0.228 | -0.169 | -0.165 | -1.003 | -0.123 | -0.044 | 1.522 | 0.049 | 2.856 | 0.408 | -0.258 | 0.303 | -0.483 | -0.635 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cf3_A_29 | 1cf3 | A | 31 | 47 | GLTTAARLTENPNISVL | HHHHHHHHTTSTT--EE | aaaaaaaaaaxaaxxbb |
1cl8_A_35 | 1cl8 | A | 40 | 56 | KLVKKALSNEYPQLSFR | HHHHHHHHHH-TTS-EE | aaaaaaaaaabaaxbbb |
1egz_A_106 | 1egz | A | 113 | 129 | FQEMARKYGNKPNVIYE | HHHHHHHHTTSTTEEEE | aaaaaaaaaaxaaxbbb |
1f6w_A_394 | 1f6w | A | 398 | 414 | EIALAQHRANAKSAKTY | HHHHHHHHTT-SS--EE | aaaaaaaaaapaapxbb |
1gpe_A_34 | 1gpe | A | 36 | 52 | GLTVAAKLTENPKIKVL | HHHHHHHHHTSTT--EE | aaaaaaaaaaxaaxxbb |
1gpu_A_504 | 1gpu | A | 507 | 523 | VSAAYKNSLESKHTPSI | HHHHHHHHHH-SS--EE | aaaaaaaaaaxaabwbb |
1gz7_A_416 | 1gz7 | A | 416 | 432 | TLARRYFLNYYQGGTKY | HHHHHHHHHH--SS-EE | aaaaaaaaaaxaabxbb |
1k1x_A_31 | 1k1x | A | 31 | 47 | YRPFMEILEEFPEMKVN | HHHHHHHHTT-TT--EE | aaaaaaaaaabaaxbbb |
1k4m_A_53 | 1k4m | A | 57 | 72 | KHMLELAIADKPLFTL. | HHHHHHHHTT-TTEEE. | aaaaaaaaaabaaxbb. |
1llf_A_416 | 1llf | A | 416 | 432 | IHARRYFLNHFQGGTKY | HHHHHHHHHH--SS-EE | aaaaaaaaaaxaabpbb |
1lpp_*_416 | 1lpp | - | 416 | 432 | TLARRYFLNHYTGGTKY | HHHHHHHHHH--SS-EE | aaaaaaaaaaxaabxbb |
1thg_*_429 | 1thg | - | 429 | 445 | QSPRRVMLSATKDVNRW | HHHHHHHHHH-TTS-EE | aaaaaaaaaaxaabxbb |
1zpd_A_515 | 1zpd | A | 518 | 534 | LAEAIKVALANTDGPTL | HHHHHHHHHH--SS-EE | aaaaaaaaaaxaabxbx |
2bce_*_394 | 2bce | - | 398 | 414 | KIAVAQHKSHAKSANTY | HHHHHHHHHH-SS--EE | aaaaaaaaaapaabxbb |
7a3h_A_112 | 7a3h | A | 119 | 135 | FDEMSELYGDYPNVIYE | HHHHHHHHTT-TTEEEE | aaaaaaaaaabaaxbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cf3_A_29 | 1cf3 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | L - 29 |
1cf3_A_29 | 1cf3 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | T - 30 |
1cf3_A_29 | 1cf3 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 31 |
1cf3_A_29 | 1cf3 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | I - 49 |
1cf3_A_29 | 1cf3 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | E - 50 |
1egz_A_106 | 1egz | A | CACALCIUM ION | Y - 120 |
1egz_A_106 | 1egz | A | CACALCIUM ION | G - 121 |
1egz_A_106 | 1egz | A | CACALCIUM ION | N - 122 |
1egz_A_106 | 1egz | A | CACALCIUM ION | K - 123 |
1egz_A_106 | 1egz | A | CACALCIUM ION | Y - 128 |
1gpe_A_34 | 1gpe | A | FADFLAVIN-ADENINE DINUCLEOTIDE | L - 34 |
1gpe_A_34 | 1gpe | A | FADFLAVIN-ADENINE DINUCLEOTIDE | T - 35 |
1gpe_A_34 | 1gpe | A | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 36 |
1gpe_A_34 | 1gpe | A | FADFLAVIN-ADENINE DINUCLEOTIDE | I - 54 |
1gpe_A_34 | 1gpe | A | FADFLAVIN-ADENINE DINUCLEOTIDE | E - 55 |
Clusters included in this Subclass |
CLUSTER: HE.6.11 |