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Information on SUBCLASS 4.6.1
Subclass Accession number: 8442
Subclass: 4.6.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 18

Average sequence ID (%) : 21.2 +/- 21.2
Average RMSD (Å) : 0.783 +/- 0.172

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXXPpXhX
(φψ)-conformation: aabaaabb
Pattern: [afilmvy]xx[afilmvy][acklv]x[afklmtv]x[P][DEGKNQS]x[filvy]x
Conservation:-0.319-0.611-0.477-0.077-0.184-0.404-0.535-0.3703.1960.372-0.3540.172-0.406
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aui_A_1261aui   A133145LWALKILYPKTLFHHHHHHHSTTTEEaaaaaaabaaabb
1azw_A_1111azw   A116128ALAYAQTHPQQVTHHHHHHH-GGGEEaaaaaaabaaaba
1cjw_A_671cjw   A7082VQHFLTLCPELSLHHHHHHH-GGGEEaaaaaaabaaabb
1cqz_A_3341cqz   A339351VWNMALFYPERVRHHHHHHH--TTEEaaaaaaabaaaba
1cvl_*_891cvl   -93105SRYVAAVAPQLVAHHHHHHH-GGGEEaaaaaaabaaaba
1dtd_A_3711dtd   A378390MDNLVAEHPGLVSHHHHHHH-TTTEEaaaaaaabaaabb
1ex9_A_841ex9   A88100IRYVAAVRPDLIAHHHHHHH-GGGEEaaaaaaabaaaba
1f0n_A_1271f0n   A132144AMILAAYHPQQFIHHHHHHH-TTTEEaaaaaaabaaaba
1fcj_A_1181fcj   A126138AEEIVASDPQKYLHHHHHHTSTTTEEaaaaaaabaaabb
1fnb_*_2131fnb   -216228FEKMKEKAPDNFRHHHHHHH-TTTEEaaaaaaabaaabb
1itu_A_781itu   A89101VHRMCRMYPETFLHHHHHHH-TTTEEaaaaaaabaaaxb
1jk7_A_1001jk7   A107119LLAYKIKYPENFFHHHHHHHSTTTEEaaaaaaabaaabb
1q44_A_2051q44   A212224YWYASRENPNKVLHHHHHHH-TTTEEaaaaaaabaaabb
1qfz_A_2071qfz   A210222FEKMKEKAPENFRHHHHHHH-TTTEEaaaaaaabaaabb
1qtr_A_1141qtr   A119131ALAYAQTHPERVSHHHHHTT-TTSEEaaaaaaabaaaba
1uf9_A_501uf9   A5062EEELKRLFPEAVVHHHHHHH-GGGEEaaaaaaabaaaxb
2hgs_A_3452hgs   A350362AIAEALAAPSRFVHHHHHHHSGGGEEaaaaaaabaaabb
4lip_D_884lip   D93105SRYVAAVAPDLVAHHHHHHH-GGGEEaaaaaaabaaaba
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ex9_A_841ex9   A     OCPOCTYL-PHOSPHINIC ACID 1,2-BIS-OCTYLCARBAMOYLOXY-ETHYL ESTER G - 84
1f0n_A_1271f0n   A     MPD2-METHYL-2,4-PENTANEDIOL M - 127
1f0n_A_1271f0n   A     MPD2-METHYL-2,4-PENTANEDIOL A - 128
1f0n_A_1271f0n   A     MPD2-METHYL-2,4-PENTANEDIOL Y - 138
1f0n_A_1271f0n   A     MPD2-METHYL-2,4-PENTANEDIOL H - 139
1f0n_A_1271f0n   A     MPD2-METHYL-2,4-PENTANEDIOL P - 140
1f0n_A_1271f0n   A     MPD2-METHYL-2,4-PENTANEDIOL Q - 141
1f0n_A_1271f0n   A     MPD2-METHYL-2,4-PENTANEDIOL Q - 142
1f0n_A_1271f0n   A     MPD2-METHYL-2,4-PENTANEDIOL F - 143
1itu_A_781itu   A     NAGN-ACETYL-D-GLUCOSAMINE M - 95
1itu_A_781itu   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 96
1qfz_A_2071qfz   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 226
1qfz_A_2071qfz   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 227
2hgs_A_3452hgs   A     ADPADENOSINE-5'-DIPHOSPHATE V - 362
2hgs_A_3452hgs   A     ADPADENOSINE-5'-DIPHOSPHATE K - 364
4lip_D_884lip   D     CCPBUTYLPHOSPHONATE Q - 88
4lip_D_884lip   D     CCPBUTYLPHOSPHONATE G - 89
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
4lip_D_884lip   D OXDOXYANION HOLEQ - 88

Clusters included in this Subclass
CLUSTER: HE.3.49
CLUSTER: HE.4.174
CLUSTER: HE.4.204
CLUSTER: HE.4.70
CLUSTER: HE.5.292
CLUSTER: HE.5.39