Information on SUBCLASS 4.7.1 |
Subclass Accession number: 8443
Subclass: 4.7.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 17 Average sequence ID (%) : 12.4 +/- 14.8 Average RMSD (Å) : 0.906 +/- 0.416 Consensus geometry
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Consensus Sequence: | pXXXXhXX |
(φψ)-conformation: | aababpbb |
Pattern: | [adeknqrs] | x | [fgilvy] | [aegknqrt] | [adekqrs] | [afiltv] | x | [eknpqr] | x | [aikltv] | [dekpqs] | x | [aglp] | x | x | [agilpvw] | x |
Conservation: | -0.261 | -1.158 | 1.534 | -0.304 | 0.725 | 0.415 | 0.123 | 2.159 | -0.331 | 0.623 | -0.161 | -1.218 | 1.075 | -0.576 | -0.637 | -0.350 | -1.658 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bif_*_304 | 1bif | - | 304 | 319 | KRTIQTAEALSVPYEQ. | HHHHHHHTTSSS--EE. | aaaaaaaaaxaxwbbx. |
1dhp_A_112 | 1dhp | A | 117 | 133 | QHFKAIAEHTDLPQILY | HHHHHHHTT-SS-EEEE | aaaaaaaaabaxwbbxb |
1fpr_A_429 | 1fpr | A | 436 | 452 | DQINQRQESLPHAGPII | HHHHHHHTTSTT---EE | aaaaaaaaaxabxxpxx |
1geq_A_65 | 1geq | A | 70 | 86 | WIVKEFRRHSSTPIVLM | HHHHHHHTT----EEEE | aaaaaaaaabappbbxb |
1hgx_A_50 | 1hgx | A | 51 | 67 | FFYTDLLKHLDFQLEPD | HHHHHHHTT--S--EEE | aaaaaaaaaxabxbbwb |
1i4n_A_92 | 1i4n | A | 92 | 108 | AFVRAARNLTCRPILAK | HHHHHHHTT--S-EEEE | aaaaaaaaabaxpbxxx |
1jqe_A_120 | 1jqe | A | 121 | 137 | SEYQSRMLEKKELQKWD | HHHHHHHTTSSS---EE | aaaaaaaaababxxxba |
1jvn_A_311 | 1jvn | A | 314 | 330 | EVLKQAAKTVFVPLTVG | HHHHHHTTT--S-EEEE | aaaaaaaaaxabpbbbb |
1ka9_F_60 | 1ka9 | F | 65 | 81 | DVVARVAERVFIPLTVG | HHHHHHHTT--S-EEEE | aaaaaaaaababpbbbb |
1l6s_A_252 | 1l6s | A | 253 | 269 | DIVRELRERTELPIGAY | HHHHHHHTT-SS-EEEE | aaaaaaaaabaxxbxbb |
1ldc_B_332 | 1ldc | B | 333 | 349 | KDIEELKKKTKLPIVIK | HHHHHHHHT-SS-EEEE | aaaaaaaaabapwbbxx |
1mv8_A_97 | 1mv8 | A | 104 | 120 | REIGFAIREKSERHTVV | HHHHHHHTT--S--EEE | aaaaaaaaaxaxxbbbb |
1o5k_A_111 | 1o5k | A | 116 | 132 | QHYKYISERTDLGIVVY | HHHHHHHTT-SS-EEEE | aaaaaaaaabaxxbbxb |
1ogs_A_157 | 1ogs | A | 159 | 175 | PLIHRALQLAQRPVSLL | HHHHHHHHH-SS--EEE | aaaaaaaaapabwbbxb |
1onr_A_66 | 1onr | A | 80 | 96 | NIGLEILKLVPGRISTE | HHHHHHHTT-SS-EEEE | aaaaaaaaabaFbbbbx |
1thf_D_58 | 1thf | D | 64 | 80 | ELVEKVAEQIDIPFTVG | HHHHHHHTT--S-EEEE | aaaaaaaaababxbbbb |
1ujp_A_29 | 1ujp | A | 34 | 49 | QAVEEVLPYADLLEIG. | HHHHHHGGG-SSEEEE. | aaaaaaaaaxabbbbx. |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1ogs_A_157 | 1ogs | A | AC5SO4 BINDING SITE FOR CHAIN A | Q - 169 |
1ogs_A_157 | 1ogs | A | AC5SO4 BINDING SITE FOR CHAIN A | R - 170 |
Clusters included in this Subclass |
CLUSTER: HE.6.179 |
CLUSTER: HE.6.45 |
CLUSTER: HE.7.2 |
CLUSTER: HE.8.32 |