Information on SUBCLASS 4.9.1 |
Subclass Accession number: 8446
Subclass: 4.9.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 15.0 +/- 19.2 Average RMSD (Å) : 0.817 +/- 0.232 Consensus geometry
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Consensus Sequence: | pXXXXXXh |
(φψ)-conformation: | aababpbb |
Pattern: | [AILT] | [aclv] | [am] | [ltwy] | [AITV] | [akrs] | [des] | x | [hlmv] | [DKPST] | [ik] | [knp] | [stv] | [GILV] | [cfgm] | [fkqy] |
Conservation: | 0.538 | -0.907 | 1.419 | -0.844 | 1.691 | -0.389 | 0.754 | -1.073 | -0.153 | 0.345 | -0.779 | -0.222 | 1.220 | 0.697 | -1.863 | -0.431 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a53_*_93 | 1a53 | - | 95 | 110 | TLRKIASSVSIPILMK | HHHHHHHH--S-EEEE | aaaaaaaababpbbxb |
1j1u_A_174 | 1j1u | A | 176 | 191 | IHMLARELLPKKVVCI | HHHHHHHHSSS--EEE | aaaaaaaaxabxxxbb |
1nth_A_309 | 1nth | A | 318 | 333 | ACATISEFTDILSGNQ | HHHHHHHH----EEEE | aaaaaaaabaxxbbbb |
1oi7_A_213 | 1oi7 | A | 217 | 232 | AAAWVKDHMKKPVVGF | HHHHHHHH--S-EEEE | aaaaaaaaxabpbbbb |
1p3y_1_106 | 1p3y | 1 | 106 | 121 | LVATTVLAHPHNTIFF | HHHHHHHHSSS--EEE | aaaaaaaaxaxxbxbb |
2scu_A_213 | 2scu | A | 217 | 232 | AAAYIKEHVTKPVVGY | HHHHHHHH--S-EEEE | aaaaaaaabaxwbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a53_*_93 | 1a53 | * | IGPINDOLE-3-GLYCEROL PHOSPHATE | K - 110 |
1j1u_A_174 | 1j1u | A | TYRTYROSINE | I - 176 |
1nth_A_309 | 1nth | A | BGX4-METHYL-PYRROLINE-5-CARBOXYLIC ACID | Q - 333 |
Clusters included in this Subclass |
CLUSTER: HE.4.122 |