Information on SUBCLASS 4.10.1 |
Subclass Accession number: 8447
Subclass: 4.10.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 20.8 +/- 21.1 Average RMSD (Å) : 0.620 +/- 0.239 Consensus geometry
|
Consensus Sequence: | XppPXXhh |
(φψ)-conformation: | aabaaabb |
Pattern: | [CLV] | [AMV] | [AGKNS] | [DKQWY] | [HQRWY] | [P] | x | x | [AF] | [GPV] | x | x |
Conservation: | 0.077 | -0.031 | -0.347 | -0.564 | -0.208 | 2.740 | -0.762 | -0.345 | -0.012 | -0.549 | -1.000 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dqz_A_125 | 1dqz | A | 133 | 144 | LAAYYPQQFPYA | HHHH-TTT-SEE | aaaabaaababb |
1h2w_A_555 | 1h2w | A | 563 | 574 | CANQRPDLFGCV | HHHH-GGG-SEE | aaaabaaababb |
1hvx_A_315 | 1hvx | A | 315 | 326 | LMKDQPTLAVTF | HHHH-GGGEEEE | aaaabaaabbxb |
1p6w_A_275 | 1p6w | A | 275 | 286 | VMGWWPAKAVTF | HHHH-GGGEEEE | aaaabaaabxxb |
1vjs_*_312 | 1vjs | - | 312 | 321 | VVSKHPLKAV.. | HHHH-GGGEE.. | aaaabaaabb.. |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1p6w_A_275 | 1p6w | A | GSD4-THIO-D-GLUCOSE | G - 277 |
1p6w_A_275 | 1p6w | A | GLCGLUCOSE | W - 278 |
1p6w_A_275 | 1p6w | A | GSD4-THIO-D-GLUCOSE | W - 278 |
1p6w_A_275 | 1p6w | A | GLCGLUCOSE | W - 279 |
1p6w_A_275 | 1p6w | A | GSD4-THIO-D-GLUCOSE | W - 279 |
1p6w_A_275 | 1p6w | A | GLCGLUCOSE | P - 280 |
Clusters included in this Subclass |
CLUSTER: HE.5.132 |