Information on SUBCLASS 10.2.1 |
Subclass Accession number: 845
Subclass: 10.2.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 6.3 (>75 %) 6.3 (>75 %) 6.3 (>75 %) 6.3.2 (>75 %) 6.3.2 (>75 %) 6.3.2 (>75 %) 6.3.2.19 (>75 %) 6.3.2.19 (>75 %) 6.3.2.19 GO : GO:0004840 (>75 %) GO:0004840 (>75 %) GO:0004840 (>75 %) GO:0004842 (>75 %) GO:0004842 (>75 %) GO:0004842 (>75 %) GO:0008639 (>75 %) GO:0008639 (>75 %) GO:0008639 (>75 %) GO:0016874 (>75 %) GO:0016874 (>75 %) GO:0016874 (>75 %) GO:0016879 (>75 %) GO:0016879 (>75 %) GO:0016879 (>75 %) GO:0016881 (>75 %) GO:0016881 (>75 %) GO:0016881 (>75 %) SCOP : 54494 (>75 %) 54494 (>75 %) 54494 (>75 %) 54495 (>75 %) 54495 (>75 %) 54495 (>75 %) 54496 (>75 %) 54496 (>75 %) 54496 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 27.8 +/- 24.4 Average RMSD (Å) : 0.550 +/- 0.238 Consensus geometry
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Consensus Sequence: | hXhPXcphhXXXXh |
(φψ)-conformation: | bbpppgbaapgpbb |
Pattern: | [ACG] | [AMTV] | [IL] | x | [GM] | [KP] | [ADK] | [DG] | [HT] | [APV] | [LWY] | [ADE] | [GS] | x | [KLMT] | [FVY] | [KR] | x |
Conservation: | -0.345 | -0.779 | 1.124 | -1.441 | 0.002 | 1.515 | -0.783 | 0.560 | 0.299 | -0.616 | 0.733 | -0.125 | 1.234 | -1.788 | -1.055 | 0.377 | 1.575 | -0.487 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e12_A_87 | 1e12 | A | 87 | 104 | GMIEMPAGHALAGEMVRS | EEEEB-TTSTTBT-EEEE | bbbbxxpgxaapvbxbxb |
1u9a_A_36 | 1u9a | A | 43 | 60 | CAIPGKKGTPWEGGLFKL | EEEE--TTSTTTT-EEEE | bbbxxxpvbaapgxbxxb |
2aak_*_32 | 2aak | - | 38 | 55 | AVIFGPDDTPWDGGTFKL | EEEE--TTSTTTT-EEEE | bbbxxpxlbaapvxbxxb |
2e2c_*_61 | 2e2c | - | 64 | 81 | ATLDGPKDTVYESLKYKL | EEEE--TTSTTTT-EEEE | bbbxppxvbaaxvxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e12_A_87 | 1e12 | A | MPG1-MONOOLEOYL-RAC-GLYCEROL | G - 94 |
1e12_A_87 | 1e12 | A | MPG1-MONOOLEOYL-RAC-GLYCEROL | H - 95 |
1e12_A_87 | 1e12 | A | MPG1-MONOOLEOYL-RAC-GLYCEROL | A - 96 |
Clusters included in this Subclass |
CLUSTER: HA.9.6 |