Logo
Information on SUBCLASS 4.16.1
Subclass Accession number: 8460
Subclass: 4.16.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 20.0 +/- 21.6
Average RMSD (Å) : 0.940 +/- 0.230

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: pXhXpXXp
(φψ)-conformation: aapabpbb
Pattern: [AILM]xx[AGIL][CLV][DEKR][AEST][FLV][KPQ][de][dhp][aclt][en][V]x[AFLV]
Conservation:-0.026-0.840-0.867-0.8970.5860.618-0.0620.4480.6560.428-0.511-1.161-0.0962.953-0.840-0.389
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b4u_B_1621b4u   B172187IRAAVESFPEDLNVHVHHHHHHTSSS--EEEEaaaaaaaxaxxxxbbb
1d06_A_1391d06   A139154LRSILDTVPDATVVSAHHHHHTT-SSEEEEEEaaaaaaaxaxxbbbbx
1j7j_A_461j7j   A4964MADLCREVQVPHEVDFHHHHHTT--S--EEEEaaaaaaaxabxbbbbb
1jl1_A_441jl1   A5267AIVALEALKEHAEVILHHHHHHT--S--EEEEaaaaaaaxabpbxbbb
1ril_*_441ril   -5267AIEGLKALKEPCEVDLHHHHHHS--S--EEEEaaaaaaababpbxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d06_A_1391d06   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 151
1d06_A_1391d06   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 152
1d06_A_1391d06   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 153

Clusters included in this Subclass
CLUSTER: HE.6.81