Information on SUBCLASS 4.16.1 |
Subclass Accession number: 8460
Subclass: 4.16.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 20.0 +/- 21.6 Average RMSD (Å) : 0.940 +/- 0.230 Consensus geometry
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Consensus Sequence: | pXhXpXXp |
(φψ)-conformation: | aapabpbb |
Pattern: | [AILM] | x | x | [AGIL] | [CLV] | [DEKR] | [AEST] | [FLV] | [KPQ] | [de] | [dhp] | [aclt] | [en] | [V] | x | [AFLV] |
Conservation: | -0.026 | -0.840 | -0.867 | -0.897 | 0.586 | 0.618 | -0.062 | 0.448 | 0.656 | 0.428 | -0.511 | -1.161 | -0.096 | 2.953 | -0.840 | -0.389 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b4u_B_162 | 1b4u | B | 172 | 187 | IRAAVESFPEDLNVHV | HHHHHHTSSS--EEEE | aaaaaaaxaxxxxbbb |
1d06_A_139 | 1d06 | A | 139 | 154 | LRSILDTVPDATVVSA | HHHHHTT-SSEEEEEE | aaaaaaaxaxxbbbbx |
1j7j_A_46 | 1j7j | A | 49 | 64 | MADLCREVQVPHEVDF | HHHHHTT--S--EEEE | aaaaaaaxabxbbbbb |
1jl1_A_44 | 1jl1 | A | 52 | 67 | AIVALEALKEHAEVIL | HHHHHHT--S--EEEE | aaaaaaaxabpbxbbb |
1ril_*_44 | 1ril | - | 52 | 67 | AIEGLKALKEPCEVDL | HHHHHHS--S--EEEE | aaaaaaababpbxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d06_A_139 | 1d06 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | V - 151 |
1d06_A_139 | 1d06 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | V - 152 |
1d06_A_139 | 1d06 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | S - 153 |
Clusters included in this Subclass |
CLUSTER: HE.6.81 |