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Information on SUBCLASS 4.17.1
Subclass Accession number: 8468
Subclass: 4.17.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 15

Average sequence ID (%) : 14.1 +/- 16.4
Average RMSD (Å) : 0.680 +/- 0.251

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXpXcXXh
(φψ)-conformation: aabplpbb
Pattern: [dehknqrsw]x[aiklv]x[adekqrs]x[cehnrsty][kpqrs][dgnq]xx[afilpv]xx
Conservation:0.289-1.1320.494-0.6990.106-0.408-0.7530.9212.271-0.256-1.0001.101-0.936-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bd3_A_1181bd3   A119132SGLRAVCRGVRIGKHHHHHHSTT--EEEaaaaaabpvxxbbb
1ee0_A_1711ee0   A180193KDLAENNKGSRVLIHHHHHHSTT--EEEaaaaaabpvxbbbb
1ei9_A_521ei9   A5669KMVEKKIPGIHVLSHHHHHHSTT--EEEaaaaaabpvpbbbx
1igw_A_2951igw   A303316QAIHAKYPGKLLAYHHHHHHSTT-EEEEaaaaaabxvpxbbb
1igw_B_2951igw   B303316QAIHAKYPGKLLAYHHHHHHSTT--EEEaaaaaabpvpxbbb
1k2y_X_2601k2y   X269282KDVVSRNPGADIIFHHHHHHSTT-EEEEaaaaaabpvpxbbb
1knw_A_1241knw   A128141DQLGQVSPGHRVWLHHHHHHSTT-EEEEaaaaaabpvxxbbb
1nyr_A_671nyr   A8394HAIKRLYGNVKF..HHHHHHSSS-EE..aaaaaabxvbxb..
1pja_A_531pja   A5770EYINETHPGTVVTVHHHHHHSTT--EEEaaaaaabpvxxbbx
1psw_A_181psw   A2234RTLQARYPQAIID.HHHHHHSTT--EE.aaaaaabxlxbbb.
1qh5_A_631qh5   A6477EKLVKLESGLKVYGHHHHHHSTT-EEEEaaaaaabxvxbbxb
1qtw_A_1191qtw   A131144NIALDKTQGVTAVIHHHHHH-SS-EEEEaaaaaabbvbxxbx
1sur_*_571sur   -6275HLVNQIRPDIPVILHHHHHHSTT-EEEEaaaaaabpvxpbxb
1tmo_*_4111tmo   -411423WIDAILEPGKTID.HHHHHHSTT-EEE.aaaaaabxvxbbx.
2shp_A_4322shp   A443456HHKQESIMDAGPVVHHHHHHSTT---EEaaaaaabpvpxpxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bd3_A_1181bd3   A     PO4PHOSPHATE ION G - 127
1bd3_A_1181bd3   A     PO4PHOSPHATE ION V - 128
1bd3_A_1181bd3   A     PO4PHOSPHATE ION R - 129
1bd3_A_1181bd3   A     PO4PHOSPHATE ION R - 137
1ee0_A_1711ee0   A     CSD3-SULFINOALANINE A - 171
1ee0_A_1711ee0   A     CSD3-SULFINOALANINE G - 172
1ee0_A_1711ee0   A     CSD3-SULFINOALANINE G - 173
1ee0_A_1711ee0   A     CSD3-SULFINOALANINE E - 197
1igw_A_2951igw   A     HGMERCURY (II) ION L - 297
1igw_A_2951igw   A     HGMERCURY (II) ION F - 301
1igw_A_2951igw   A     HGMERCURY (II) ION Y - 316
1igw_A_2951igw   A     HGMERCURY (II) ION N - 317
1igw_A_2951igw   A     PYRPYRUVIC ACID N - 317
1igw_B_2951igw   B     HGMERCURY (II) ION C - 318
1knw_A_1241knw   A     PLPPYRIDOXAL-5'-PHOSPHATE R - 142
1knw_A_1241knw   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID R - 142
1nyr_A_671nyr   A     ZNZINC ION H - 75
1nyr_A_671nyr   A     ZNZINC ION H - 79
1psw_A_181psw   A     MSESELENOMETHIONINE Q - 18
1psw_A_181psw   A     MSESELENOMETHIONINE S - 19
1psw_A_181psw   A     MSESELENOMETHIONINE L - 20
1psw_A_181psw   A     MSESELENOMETHIONINE Y - 21
1psw_A_181psw   A     MSESELENOMETHIONINE Y - 28
1psw_A_181psw   A     MSESELENOMETHIONINE P - 29
1psw_A_181psw   A     MSESELENOMETHIONINE Q - 30
1psw_A_181psw   A     MSESELENOMETHIONINE A - 31
1psw_A_181psw   A     MSESELENOMETHIONINE I - 32
1psw_A_181psw   A     MSESELENOMETHIONINE I - 33
1psw_A_181psw   A     MSESELENOMETHIONINE D - 34
1qtw_A_1191qtw   A     ZNZINC ION E - 145
2shp_A_4322shp   A     CATDODECANE-TRIMETHYLAMINE P - 432
2shp_A_4322shp   A     CATDODECANE-TRIMETHYLAMINE G - 434
2shp_A_4322shp   A     CATDODECANE-TRIMETHYLAMINE V - 435
2shp_A_4322shp   A     CATDODECANE-TRIMETHYLAMINE L - 436
2shp_A_4322shp   A     CATDODECANE-TRIMETHYLAMINE F - 438
2shp_A_4322shp   A     CATDODECANE-TRIMETHYLAMINE L - 439

Clusters included in this Subclass
CLUSTER: HE.3.235
CLUSTER: HE.4.97
CLUSTER: HE.5.54