Information on SUBCLASS 4.17.4 |
Subclass Accession number: 8471
Subclass: 4.17.4 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: Conserved Annotation EC : 2 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 13.0 +/- 14.2 Average RMSD (Å) : 0.733 +/- 0.058 Consensus geometry
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Consensus Sequence: | XXpPcXXh |
(φψ)-conformation: | aabplpbb |
Pattern: | [FGV] | [DGQ] | x | [ILV] | [DER] | [QRS] | [LW] | [AGL] | x | x | [KRS] | [P] | [GN] | x | x | [FV] | [LMW] | [IL] |
Conservation: | -0.986 | -0.362 | -0.293 | 0.539 | -0.016 | -0.154 | 0.207 | -0.848 | -0.640 | -0.778 | -0.016 | 3.243 | 0.904 | -0.778 | -1.056 | 0.114 | 0.123 | 0.799 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1knw_A_124 | 1knw | A | 124 | 141 | VDMLDQLGQVSPGHRVWL | HHHHHHHHHHSTT-EEEE | aaaaaaaaaabpvxxbbb |
1p9l_A_81 | 1p9l | A | 84 | 101 | FQQVESWLVAKPNTSVLI | HHHHHHHHHTSTT-EEEE | aaaaaaaaaabxvbbbbb |
1udg_*_165 | 1udg | - | 170 | 187 | GGVIRRLAARRPGLVFML | HHHHHHHHHH-SS-EEEE | aaaaaaaaaabxvxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1knw_A_124 | 1knw | A | PLPPYRIDOXAL-5'-PHOSPHATE | R - 142 |
1knw_A_124 | 1knw | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | R - 142 |
Clusters included in this Subclass |
CLUSTER: HE.5.294 |