Logo
Information on SUBCLASS 4.18.1
Subclass Accession number: 8472
Subclass: 4.18.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 22.9 +/- 24.5
Average RMSD (Å) : 0.789 +/- 0.271

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXcXXXhX
(φψ)-conformation: aallppbb
Pattern: xxx[adkn]xx[deg]xxx[ilmv]x
Conservation:-0.9370.131-0.8410.322-0.516-0.5821.8330.307-1.0810.6941.631-0.961
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d9e_A_11831d9e   A11861197IMKKVSGNSPVIHHHHHTTS--EEaaaaaavvpxbb
1d9e_D_41831d9e   D41864197IMKKVSGNSPVIHHHHHTTT--EEaaaaaavlpwbb
1h49_A_3841h49   A392403IMKNKYGNPPIYHHHHTS----EEaaaaaavlxpbb
1hl2_A_1151hl2   A124135AIIDSADGLPMVHHHHHHTTS-EEaaaaaalgxxxb
1kbl_A_5951kbl   A604615AMYKALEGRPMTHHHHHHTT--EEaaaaaalvxxbx
1l9m_A_2521l9m   A257268KNWKKSGLSPVRHHHHHTTS--EEaaaaaavvxpxb
1qor_A_2511qor   A251262GILNQKGSLYVTHHHHHTTS-EEEaaaaaaglxbbb
1qox_A_3331qox   A341352YTADKYGNPTLYHHHHHTTS--EEaaaaaavlxxbb
1tca_*_761tca   -89100ALYAGSGNNKLPHHHHHTTS--EEaaaaaavlbxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h49_A_3841h49   A     BGCBETA-D-GLUCOSE E - 406
1hl2_A_1151hl2   A     3PY3-HYDROXYPYRUVIC ACID Y - 137
1qor_A_2511qor   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE N - 254
1tca_*_761tca   *     NAGN-ACETYL-D-GLUCOSAMINE Q - 77
1tca_*_761tca   *     NAGN-ACETYL-D-GLUCOSAMINE V - 78
1tca_*_761tca   *     NAGN-ACETYL-D-GLUCOSAMINE N - 79
1tca_*_761tca   *     NAGN-ACETYL-D-GLUCOSAMINE Y - 82
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h49_A_3841h49   A AC4BGC BINDING SITE FOR CHAIN AE - 406
1hl2_A_1151hl2   A AC13PY BINDING SITE FOR CHAIN AY - 137
1qox_A_3331qox   A CAAACTIVE SITE (CHAIN A)E - 355

Clusters included in this Subclass
CLUSTER: HE.4.112
CLUSTER: HE.6.101