Information on SUBCLASS 4.18.1 |
Subclass Accession number: 8472
Subclass: 4.18.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 22.9 +/- 24.5 Average RMSD (Å) : 0.789 +/- 0.271 Consensus geometry
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Consensus Sequence: | XXcXXXhX |
(φψ)-conformation: | aallppbb |
Pattern: | x | x | x | [adkn] | x | x | [deg] | x | x | x | [ilmv] | x |
Conservation: | -0.937 | 0.131 | -0.841 | 0.322 | -0.516 | -0.582 | 1.833 | 0.307 | -1.081 | 0.694 | 1.631 | -0.961 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d9e_A_1183 | 1d9e | A | 1186 | 1197 | IMKKVSGNSPVI | HHHHHTTS--EE | aaaaaavvpxbb |
1d9e_D_4183 | 1d9e | D | 4186 | 4197 | IMKKVSGNSPVI | HHHHHTTT--EE | aaaaaavlpwbb |
1h49_A_384 | 1h49 | A | 392 | 403 | IMKNKYGNPPIY | HHHHTS----EE | aaaaaavlxpbb |
1hl2_A_115 | 1hl2 | A | 124 | 135 | AIIDSADGLPMV | HHHHHHTTS-EE | aaaaaalgxxxb |
1kbl_A_595 | 1kbl | A | 604 | 615 | AMYKALEGRPMT | HHHHHHTT--EE | aaaaaalvxxbx |
1l9m_A_252 | 1l9m | A | 257 | 268 | KNWKKSGLSPVR | HHHHHTTS--EE | aaaaaavvxpxb |
1qor_A_251 | 1qor | A | 251 | 262 | GILNQKGSLYVT | HHHHHTTS-EEE | aaaaaaglxbbb |
1qox_A_333 | 1qox | A | 341 | 352 | YTADKYGNPTLY | HHHHHTTS--EE | aaaaaavlxxbb |
1tca_*_76 | 1tca | - | 89 | 100 | ALYAGSGNNKLP | HHHHHTTS--EE | aaaaaavlbxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h49_A_384 | 1h49 | A | BGCBETA-D-GLUCOSE | E - 406 |
1hl2_A_115 | 1hl2 | A | 3PY3-HYDROXYPYRUVIC ACID | Y - 137 |
1qor_A_251 | 1qor | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | N - 254 |
1tca_*_76 | 1tca | * | NAGN-ACETYL-D-GLUCOSAMINE | Q - 77 |
1tca_*_76 | 1tca | * | NAGN-ACETYL-D-GLUCOSAMINE | V - 78 |
1tca_*_76 | 1tca | * | NAGN-ACETYL-D-GLUCOSAMINE | N - 79 |
1tca_*_76 | 1tca | * | NAGN-ACETYL-D-GLUCOSAMINE | Y - 82 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h49_A_384 | 1h49 | A | AC4BGC BINDING SITE FOR CHAIN A | E - 406 |
1hl2_A_115 | 1hl2 | A | AC13PY BINDING SITE FOR CHAIN A | Y - 137 |
1qox_A_333 | 1qox | A | CAAACTIVE SITE (CHAIN A) | E - 355 |
Clusters included in this Subclass |
CLUSTER: HE.4.112 |
CLUSTER: HE.6.101 |