Information on SUBCLASS 4.34.1 |
Subclass Accession number: 8502
Subclass: 4.34.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 23.6 +/- 27.4 Average RMSD (Å) : 0.537 +/- 0.334 Consensus geometry
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Consensus Sequence: | XpXphcph |
(φψ)-conformation: | aappbabb |
Pattern: | [gkqrt] | [ilmpv] | x | [aeqrs] | [AENQR] | [lt] | [deqs] | [AGSV] | [DGT] | [DEGT] | [CNV] | [itwy] | [AIMV] |
Conservation: | -0.985 | -0.684 | -1.155 | -0.862 | 0.275 | -0.186 | 0.067 | -0.122 | 1.957 | 0.163 | 0.532 | -0.864 | 1.863 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a4s_A_437 | 1a4s | A | 442 | 454 | RVAANLEAGTCYI | HHHHHS-SSEEEE | aaaaaxxbabbxb |
1ad3_A_370 | 1ad3 | A | 375 | 387 | KMIAETSSGGVTA | HHHTT---SEEEE | aaaaabbbabbbx |
1bxs_A_436 | 1bxs | A | 441 | 453 | TVSSALQSGTVWV | HHHHHS--SEEEE | aaaaaxxbabbxb |
1chm_A_86 | 1chm | A | 86 | 98 | QPWRRTVGTDNIV | HHHHH--SSEEEE | aaaaaxxbabbbb |
1euh_A_414 | 1euh | A | 419 | 431 | GIAEQLEVGTVHI | HHHHHS-SSEEEE | aaaaaxxbabbbx |
1mjf_A_87 | 1mjf | A | 90 | 102 | REVLQHDVDEVIM | HHHTTS--SEEEE | aaaaaxxxabbbb |
1o04_A_436 | 1o04 | A | 441 | 453 | YLSQALQAGTVWV | HHHHH--SSEEEE | aaaaaxxbabbxb |
1o9j_A_436 | 1o9j | A | 441 | 453 | TVSSALQAGTVWV | HHHHHS-SSEEEE | aaaaaxxbabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | A - 439 |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | N - 440 |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | Y - 441 |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | L - 442 |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | S - 443 |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | Q - 444 |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | A - 445 |
1o04_A_436 | 1o04 | A | GAIGUANIDINE | Q - 447 |
Clusters included in this Subclass |
CLUSTER: HE.5.82 |