Information on SUBCLASS 4.38.1 |
Subclass Accession number: 8507
Subclass: 4.38.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 14.3 +/- 16.8 Average RMSD (Å) : 0.967 +/- 0.115 Consensus geometry
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Consensus Sequence: | XchXpXhX |
(φψ)-conformation: | aagpaabb |
Pattern: | [KPQ] | [AEQ] | [GI] | [AER] | [GKN] | [GL] | x | [EK] | x | [AI] | [AIT] | [GI] | [MV] | x |
Conservation: | 0.349 | 0.202 | -1.112 | -0.385 | 0.056 | -0.393 | -0.532 | 2.395 | -0.678 | 0.373 | -0.532 | -0.985 | 1.772 | -0.532 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aor_A_165 | 1aor | A | 165 | 178 | PAGENLVKFAAIMN | HHHHTT-TTB-EEE | aaaaalxaaxbbbb |
1n8f_A_278 | 1n8f | A | 287 | 300 | QQIAGGEKAIIGVM | HHHHTT--SEEEEE | aaaaagxaaxabbb |
3tmk_A_154 | 3tmk | A | 170 | 183 | KEIRKGDESITIVD | HHHHTT--SEEEEE | aaaaagxaabbxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1aor_A_165 | 1aor | A | PTETUNGSTOPTERIN COFACTOR | A - 175 |
1aor_A_165 | 1aor | A | PTETUNGSTOPTERIN COFACTOR | M - 177 |
1aor_A_165 | 1aor | A | NAWSODIUM ION, 3 WATERS COORDINATED | M - 177 |
1aor_A_165 | 1aor | A | PTETUNGSTOPTERIN COFACTOR | N - 178 |
1n8f_A_278 | 1n8f | A | PEPPHOSPHOENOLPYRUVATE | M - 300 |
1n8f_A_278 | 1n8f | A | MNMANGANESE (II) ION | E - 302 |
1n8f_A_278 | 1n8f | A | PEPPHOSPHOENOLPYRUVATE | E - 302 |
3tmk_A_154 | 3tmk | A | T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE | Q - 157 |
Clusters included in this Subclass |
CLUSTER: HE.6.202 |