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Information on SUBCLASS 4.38.1
Subclass Accession number: 8507
Subclass: 4.38.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 14.3 +/- 16.8
Average RMSD (Å) : 0.967 +/- 0.115

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XchXpXhX
(φψ)-conformation: aagpaabb
Pattern: [KPQ][AEQ][GI][AER][GKN][GL]x[EK]x[AI][AIT][GI][MV]x
Conservation:0.3490.202-1.112-0.3850.056-0.393-0.5322.395-0.6780.373-0.532-0.9851.772-0.532
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aor_A_1651aor   A165178PAGENLVKFAAIMNHHHHTT-TTB-EEEaaaaalxaaxbbbb
1n8f_A_2781n8f   A287300QQIAGGEKAIIGVMHHHHTT--SEEEEEaaaaagxaaxabbb
3tmk_A_1543tmk   A170183KEIRKGDESITIVDHHHHTT--SEEEEEaaaaagxaabbxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aor_A_1651aor   A     PTETUNGSTOPTERIN COFACTOR A - 175
1aor_A_1651aor   A     PTETUNGSTOPTERIN COFACTOR M - 177
1aor_A_1651aor   A     NAWSODIUM ION, 3 WATERS COORDINATED M - 177
1aor_A_1651aor   A     PTETUNGSTOPTERIN COFACTOR N - 178
1n8f_A_2781n8f   A     PEPPHOSPHOENOLPYRUVATE M - 300
1n8f_A_2781n8f   A     MNMANGANESE (II) ION E - 302
1n8f_A_2781n8f   A     PEPPHOSPHOENOLPYRUVATE E - 302
3tmk_A_1543tmk   A     T5AP1-(5'-ADENOSYL)P5-(5'-THYMIDYL)PENTAPHOSPHATE Q - 157

Clusters included in this Subclass
CLUSTER: HE.6.202