Information on SUBCLASS 4.39.1 |
Subclass Accession number: 8508
Subclass: 4.39.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 51.7 +/- 5.2 Average RMSD (Å) : 0.467 +/- 0.208 Consensus geometry
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Consensus Sequence: | hpphDGhA |
(φψ)-conformation: | aapaaabb |
Pattern: | [FL] | [AG] | [EK] | [A] | [ALV] | [KQS] | [KQ] | [AP] | [D] | [G] | [IL] | [A] | [V] | [ILV] | [G] | [IV] | [FL] | [LM] | [K] | [IV] |
Conservation: | -0.645 | -0.645 | -0.319 | 0.347 | -1.655 | -1.321 | -0.377 | -0.772 | 1.848 | 1.848 | -0.367 | 0.347 | 0.347 | -0.654 | 1.848 | -0.022 | -0.645 | -0.250 | 1.097 | -0.010 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1flj_A_131 | 1flj | A | 131 | 150 | FGEALKQPDGIAVVGIFLKI | HHHHTTSTTSEEEEEEEEEE | aaaaaaxaaabbbxbbxbbx |
1hcb_*_131 | 1hcb | - | 131 | 150 | LAEAASKADGLAVIGVLMKV | HHHHTTSTTSEEEEEEEEEE | aaaaaaxaaabbbxbbxbbx |
1moo_A_131 | 1moo | A | 131 | 150 | FGKAVQQPDGLAVLGIFLKV | HHHHTTSTT-EEEEEEEEEE | aaaaaabaaabbbxbbxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1hcb_*_131 | 1hcb | * | ZNZINC ION | V - 143 |
1hcb_*_131 | 1hcb | * | BCTBICARBONATE ION | V - 143 |
1moo_A_131 | 1moo | A | HGMERCURY (II) ION | A - 134 |
1moo_A_131 | 1moo | A | HGMERCURY (II) ION | V - 135 |
1moo_A_131 | 1moo | A | HGMERCURY (II) ION | Q - 136 |
1moo_A_131 | 1moo | A | HGMERCURY (II) ION | Q - 137 |
1moo_A_131 | 1moo | A | HGMERCURY (II) ION | P - 138 |
1moo_A_131 | 1moo | A | HGMERCURY (II) ION | D - 139 |
1moo_A_131 | 1moo | A | HGMERCURY (II) ION | G - 140 |
Clusters included in this Subclass |
CLUSTER: HE.5.293 |