Information on SUBCLASS 4.42.3 |
Subclass Accession number: 8513
Subclass: 4.42.3 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 8.8 +/- 9.4 Average RMSD (Å) : 1.100 +/- 0.173 Consensus geometry
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Consensus Sequence: | XpXXhpXh |
(φψ)-conformation: | aapapabb |
Pattern: | x | [MPT] | x | x | [ILT] | x | [HK] | [ILY] | [GV] | x | [DKQ] | x | [IKV] | [AF] | [DR] | x | [AIL] | [AVY] | [LVY] |
Conservation: | -0.829 | -0.281 | -1.377 | -1.240 | 0.267 | -0.418 | 3.004 | 0.541 | -0.171 | -0.829 | 0.678 | 0.097 | -0.281 | 0.382 | 1.313 | -0.966 | 0.130 | -0.281 | 0.267 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1esw_A_431 | 1esw | A | 431 | 449 | VPWALMHLGMKSVARLAVY | HHHHHHHHHHHSS-SEEEE | aaaaaaaaaaaxapabbbb |
1luc_B_17 | 1luc | B | 23 | 41 | EMLDTAHYVDQLKFDTLAV | HHHHHHHHHHTSS--EEEE | aaaaaaaaaaaxapabbbb |
1qam_A_107 | 1qam | A | 107 | 125 | STDIIRKIVFDSIADEIYL | HHHHHHHHHHS---SEEEE | aaaaaaaaaaabapabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qam_A_107 | 1qam | A | ACTACETATE ION | T - 108 |
Clusters included in this Subclass |
CLUSTER: HE.5.278 |