Information on SUBCLASS 4.51.1 |
Subclass Accession number: 8524
Subclass: 4.51.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 11.1 +/- 11.4 Average RMSD (Å) : 1.133 +/- 0.289 Consensus geometry
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Consensus Sequence: | XXXXXhXX |
(φψ)-conformation: | aalbpabb |
Pattern: | [EP] | [GST] | x | [KQW] | [KL] | [AEL] | x | x | [ALT] | x | [AQR] | [HPS] | [GV] | x | x |
Conservation: | 1.842 | 0.208 | -0.613 | 0.208 | 0.160 | -1.434 | 0.592 | -0.613 | -0.449 | 1.956 | 0.044 | -0.120 | 0.592 | -0.941 | -1.434 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dmh_A_207 | 1dmh | A | 207 | 221 | PTQQLLNQLGRHGNR | HHHHHHHHTT---EE | aaaaaaaaavbxabb |
1h16_A_48 | 1h16 | A | 59 | 73 | EGVKLENRTHAPVDF | HHHHHHHHHTS-SEE | aaaaaaaaalbxabb |
1kas_*_20 | 1kas | - | 21 | 35 | ESTWKALLAGQSGIS | HHHHHHHHTT---EE | aaaaaaaaavxxaxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dmh_A_207 | 1dmh | A | LIO[1-PENTADECANOYL-2-DECANOYL-GLYCEROL-3-YL]PHOSPHONYL CHOLINE | Q - 210 |
1dmh_A_207 | 1dmh | A | LIO[1-PENTADECANOYL-2-DECANOYL-GLYCEROL-3-YL]PHOSPHONYL CHOLINE | L - 211 |
1dmh_A_207 | 1dmh | A | LIO[1-PENTADECANOYL-2-DECANOYL-GLYCEROL-3-YL]PHOSPHONYL CHOLINE | Q - 214 |
1dmh_A_207 | 1dmh | A | FEFE (III) ION | R - 221 |
1dmh_A_207 | 1dmh | A | MCT4-METHYLCATECHOL | R - 221 |
1h16_A_48 | 1h16 | A | DTLD-TREITOL | E - 64 |
1h16_A_48 | 1h16 | A | DTLD-TREITOL | N - 65 |
1h16_A_48 | 1h16 | A | DTLD-TREITOL | H - 68 |
1h16_A_48 | 1h16 | A | DTLD-TREITOL | A - 69 |
1h16_A_48 | 1h16 | A | DTLD-TREITOL | P - 70 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h16_A_48 | 1h16 | A | NA6NA BINDING SITE FOR CHAIN A | K - 62 |
1h16_A_48 | 1h16 | A | DT2DTL BINDING SITE FOR CHAIN A | H - 68 |
Clusters included in this Subclass |
CLUSTER: HE.5.233 |