Information on SUBCLASS 4.52.1 |
Subclass Accession number: 8526
Subclass: 4.52.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 2 Average sequence ID (%) : 11.5 +/- 0.0 Average RMSD (Å) : 0.700 +/- 0.000 Consensus geometry
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Consensus Sequence: | cppphKph |
(φψ)-conformation: | aabapabb |
Pattern: | [GY] | [G] | [AT] | x | [AL] | [LM] | [NR] | [HV] | [AL] | [AK] | [D] | [FY] | [LV] | [AR] | [KN] | [NT] | [ST] | [NS] | [IV] | [K] | [RY] | [FV] | [LW] | [TV] | [SY] | [AN] |
Conservation: | -0.769 | 2.469 | -0.388 | -0.198 | -0.960 | 0.374 | -0.007 | -0.960 | -0.960 | -0.769 | 2.469 | 1.517 | -0.198 | -0.769 | -0.007 | -0.007 | -0.007 | 0.183 | 0.564 | 1.707 | -0.579 | -0.579 | -0.007 | -0.388 | -0.769 | -0.960 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ars_*_107 | 1ars | - | 107 | 132 | GGTGALRVAADFLAKNTSVKRVWVSN | HHHHHHHHHHHHHHHHS---EEEEEE | eaaaaaaaaaaaaaaabaxabbxbxb |
1ygh_A_188 | 1ygh | A | 188 | 213 | YGAHLMNHLKDYVRNTSNIKYFLTYA | HHHHHHHHHHHHHHHHS---EEEEEE | aaaaaaaaaaaaaaaabaxabbbbxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ars_*_107 | 1ars | * | PLPPYRIDOXAL-5'-PHOSPHATE | G - 107 |
1ars_*_107 | 1ars | * | PLPPYRIDOXAL-5'-PHOSPHATE | G - 108 |
1ars_*_107 | 1ars | * | PLPPYRIDOXAL-5'-PHOSPHATE | T - 109 |
1ars_*_107 | 1ars | * | PLPPYRIDOXAL-5'-PHOSPHATE | G - 110 |
1ars_*_107 | 1ars | * | PLPPYRIDOXAL-5'-PHOSPHATE | L - 112 |
1ygh_A_188 | 1ygh | A | GOLGLYCEROL | N - 202 |
1ygh_A_188 | 1ygh | A | GOLGLYCEROL | T - 203 |
Clusters included in this Subclass |
CLUSTER: HE.5.273 |