Information on SUBCLASS 4.70.1 |
Subclass Accession number: 8544
Subclass: 4.70.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 6.1 +/- 12.0 Average RMSD (Å) : 0.667 +/- 0.252 Consensus geometry
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Consensus Sequence: | XXXcXpph |
(φψ)-conformation: | aaplbabb |
Pattern: | x | x | [CDV] | [FMT] | [AD] | [GN] | x | [DET] | [HST] | [ILW] | [IVW] |
Conservation: | -1.663 | -0.455 | -0.817 | -0.214 | 0.878 | 2.133 | -0.817 | 0.511 | 0.148 | 0.148 | 0.148 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cfz_A_49 | 1cfz | A | 49 | 59 | LGDMANRDHLI | HHHHSS-SEEE | aaaaxlbabbb |
1fp2_A_183 | 1fp2 | A | 183 | 193 | DFVFDGLESIV | HHHHTT-SEEE | aaaapvxabbb |
1sgp_E_56 | 1sgp | E | 56 | 66 | GHCTDGATTWW | HHHHTT--EEE | aaaaxvbaxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cfz_A_49 | 1cfz | A | CDCADMIUM ION | D - 62 |
1cfz_A_49 | 1cfz | A | CDCADMIUM ION | A - 63 |
1fp2_A_183 | 1fp2 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | D - 194 |
1fp2_A_183 | 1fp2 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | V - 195 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1cfz_A_49 | 1cfz | A | CDBMETAL ION WAS MODELED AS A CADMIUM (FROM THE CRYSTALLIZATION BUFFER) IN VIVO: PERHAPS NICKEL. | D - 62 |
Clusters included in this Subclass |
CLUSTER: HE.3.198 |