Information on SUBCLASS 18.1.1 |
Subclass Accession number: 856
Subclass: 18.1.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.15 (>75 %) 1.15.1 (>75 %) 1.15.1.1 GO : GO:0004784 (>75 %) GO:0004785 (>75 %) GO:0016721 (>75 %) SCOP : 48725 (>75 %) 49329 (>75 %) 49330 (>75 %) 50036 (>75 %) 50044 (>75 %) 50045 (>75 %) |
Number of loops: 6 Average sequence ID (%) : 26.7 +/- 20.4 Average RMSD (Å) : 0.367 +/- 0.082 Consensus geometry
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Consensus Sequence: | XAXYDYpXXpXpphphXpcpXh |
(φψ)-conformation: | bpabpbbpabaapbpbbpgpbb |
Pattern: | [AFVY] | [kltv] | [AS] | [ekl] | [KY] | [AD] | [FY] | [dekqt] | [AEKS] | [aekr] | [ENRST] | [DEGPS] | [DENRST] | [DE] | [ILV] | [DST] | [FLMV] | [klmv] | [EKL] | [DGN] | [DE] | [aikv] | [ILV] | [eqt] |
Conservation: | -0.526 | -1.053 | 0.785 | -0.952 | 1.355 | 0.914 | 2.537 | -0.941 | -0.405 | -0.872 | -0.551 | -0.711 | -0.660 | 1.331 | 0.518 | 0.050 | -0.114 | -1.060 | -0.293 | 0.429 | 1.498 | -1.086 | 0.623 | -0.816 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fmk_*_84 | 1fmk | - | 86 | 109 | FVALYDYESRTETDLSFKKGERLQ | EEESS-B---SSSB--B-TT-EEE | bbxabxbxpabaaxbpbbpvxxbx |
1i07_A_8 | 1i07 | A | 9 | 32 | AKSKYDFVARNSSELSVMKDDVLE | EE-SS-B--SSTTS--B-TT-EEE | bbxabxbbxabaaxbxbbpvxxbx |
1jo8_A_3 | 1jo8 | A | 3 | 26 | ATAEYDYDAAEDNELTFVENDKII | EEESS-B---STTB--B-TT-EEE | bbxabxbbpabaabxbbbpvxxbb |
1ng2_A_229 | 1ng2 | A | 231 | 254 | YVAIKAYTAVEGDEVSLLEGEAVE | EEESS-B---STTB--B-TT-EEE | bbxabxbxxabaabbxbxpgxxbb |
1pht_*_4 | 1pht | - | 8 | 31 | YRALYDYKKEREEDIDLHLGDILT | EEE-S-B--SSTTB--B-TT-EEE | bbxabxbbpaxaaxbxbbpvpbbb |
1pwt_*_7 | 1pwt | - | 8 | 31 | VLALYDYQEKSPREVTMKKGDILT | EEE-S-B---STTB--B-TT-EEE | bbxabxbxpabaaxbxbbpvxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jo8_A_3 | 1jo8 | A | SULSULFATE ANION | E - 6 |
Clusters included in this Subclass |
CLUSTER: HA.17.0 |
CLUSTER: HA.18.0 |