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PDB code:

Information on SUBCLASS 5.3.2

Subclass Accession number: 8561 Subclass: 5.3.2 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates:

Number of loops: 11 Average sequence ID (%) : 14.4 +/- 15.2 Average RMSD (Å) : 0.718 +/- 0.209 Consensus geometry d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ars_*_170	1ars	-	174	187	INSLNEAQAGDVVL	HHHHTT--TT-EEE	aaaaaaxxxvxxbx
1b8a_A_57	1b8a	A	60	73	FKLIPKLRSEDVVA	HHHGGG--TT-EEE	aaaaaaxbpvxbbb
1c0a_A_54	1c0a	A	57	70	LKLASELRNEFCIQ	HHHHTT--TT-EEE	aaaaaaxbpvxxbb
1eov_A_151	1eov	A	154	167	VKWAGSLNLESIVL	HHHHTT--TT-EEE	aaaaaaxxpvxbbb
1ibj_A_157	1ibj	A	162	175	SAVTHLIKNGEEIV	HHHHTTS-TT-EEE	aaaaaaxxpvxbbb
1l0w_A_57	1l0w	A	57	70	YATAERVRPEWVVR	HHHHTT--TT-EEE	aaaaaaxbpvxbbb
1nw3_A_247	1nw3	A	254	267	KERFANMKEGGRIV	HHHHTT--TT-EEE	aaaaaaxxpvxbbb
1poi_B_9	1poi	B	15	28	VTIAKQIKNGQVVT	HHHHTT--TT-EEE	aaaaaaxxxvxxbx
1r6x_A_90	1r6x	A	90	103	EAFANQIKPDTRIA	HHHHHT--TT-EEE	aaaaaabbpvxbbx
1sfe_*_95	1sfe	-	101	114	WQALRTIPCGETVS	HHHHTTS-TT--EE	aaaaaaxxxgbbbx
7aat_A_170	7aat	A	174	187	MEDISKIPEKSIIL	HHHHTTS-TT-EEE	aaaaaaxppvxbbx

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1ars_*_170	1ars	*	PLPPYRIDOXAL-5'-PHOSPHATE	H - 189
1c0a_A_54	1c0a	A	QUO2-AMINO-7-DEAZA-(2'',3''-DIHYDROXY-CYCLOPENTYLAMINO)-GUANOSINE-5'-MONOPHOSPHATE	R - 76
1ibj_A_157	1ibj	A	PLPPYRIDOXAL-5'-PHOSPHATE	G - 157
1ibj_A_157	1ibj	A	PLPPYRIDOXAL-5'-PHOSPHATE	M - 158
1ibj_A_157	1ibj	A	PLPPYRIDOXAL-5'-PHOSPHATE	A - 159
1ibj_A_157	1ibj	A	PLPPYRIDOXAL-5'-PHOSPHATE	L - 161
1nw3_A_247	1nw3	A	SAMS-ADENOSYLMETHIONINE	V - 249

Clusters included in this Subclass

CLUSTER: HE.6.34

CLUSTER: HE.8.69

CLUSTER: HE.8.75

CLUSTER: HE.8.90

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